CRAN

TestCor 0.0.0.9

FWER and FDR Controlling Procedures for Multiple Correlation Tests

Released Feb 8, 2019 by Gannaz Irène

Dependencies

MASS 7.3-51.1 Rcpp

Different multiple testing procedures for correlation tests are implemented. These procedures were shown to theoretically control asymptotically the Family Wise Error Rate (Roux (2018) ) or the False Discovery Rate (Cai & Liu (2016) ). The package gather four test statistics used in correlation testing, four FWER procedures with either single step or stepdown versions, and four FDR procedures.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>TestCor</artifactId>
    <version>0.0.0.9-b1</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:TestCor')

Test Results

This package was last tested against Renjin 0.9.2719 on Feb 11, 2019.

• ApplyFdrCor-examples
• ApplyFwerCor-examples
• ApplyFwerCor_oracle-examples
• BHBootCor-examples
• BHCor-examples
• BonferroniCor-examples
• BonferroniCor_SD-examples
• BootRWCor-examples
• BootRWCor_SD-examples
• LCTboot-examples
• LCTnorm-examples
• SidakCor-examples
• SidakCor_SD-examples
• SimuFdr-examples
• SimuFwer-examples
• SimuFwer_oracle-examples
• covDcor-examples
• covDcorNorm-examples
• eval_stat-examples
• maxTinftyCor-examples
• maxTinftyCor_SD-examples
• vectorize-examples

Source

View GitHub Mirror

Release History

• 0.0.0.9