CRAN
TreeSearch 0.3.2
Phylogenetic Tree Search Using Custom Optimality Criteria
Released Jun 3, 2019 by Martin R. Smith
This package cannot yet be used with Renjin it depends on other packages which are not available: phangorn 2.5.5, R.cache 0.13.0, and Rdpack 0.11-0
An older version of this package is
more compatible with Renjin.
Dependencies
phangorn 2.5.5 Rdpack 0.11-0 R.cache 0.13.0 clue 0.3-57 colorspace 1.4-1 ape 5.3 memoise 1.1.0 Rcpp
Searches for phylogenetic trees that are optimal using a user-defined criterion. Implements Profile Parsimony (Faith and Trueman, 2001)