CRAN

adaptiveGPCA 0.1.2

Adaptive Generalized PCA

Released Mar 14, 2018 by Julia Fukuyama

This package cannot yet be used with Renjin it depends on other packages which are not available: phyloseq, ggplot2 2.2.1, and shiny 1.0.5

Dependencies

ggplot2 2.2.1 shiny 1.0.5 ape 5.1

Implements adaptive gPCA, as described in: Fukuyama, J. (2017) . The package also includes functionality for applying the method to 'phyloseq' objects so that the method can be easily applied to microbiome data and a 'shiny' app for interactive visualization.

Source

R

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Release History