CRAN

adaptiveGPCA 0.1

Adaptive Generalized PCA

This package cannot yet be used with Renjin it depends on other packages which are not available: ape 4.1, phyloseq 1.16.2, ggplot2 2.2.1, and shiny 1.0.3

Dependencies

shiny 1.0.3 phyloseq 1.16.2 ggplot2 2.2.1 ape 4.1

Implements adaptive gPCA, as described in: Fukuyama, J. (2017) . The package also includes functionality for applying the method to 'phyloseq' objects so that the method can be easily applied to microbiome data and a 'shiny' app for interactive visualization.

Source

R

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