CRAN

adaptivetau 2.2-1

Tau-Leaping Stochastic Simulation

Released Oct 25, 2016 by Philip Johnson

This package can be loaded by Renjin but there was an error compiling C/FORTRAN sources and 2 out 3 tests failed.

Implements adaptive tau leaping to approximate the trajectory of a continuous-time stochastic process as described by Cao et al. (2007) The Journal of Chemical Physics . This package is based upon work supported by NSF DBI-0906041 and NIH K99-GM104158 to Philip Johnson and NIH R01-AI049334 to Rustom Antia.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>adaptivetau</artifactId>
    <version>2.2-1-b12</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:adaptivetau')

Test Results

This package was last tested against Renjin 0.8.2442 on Sep 25, 2017.

Source

R
C
C++

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Release History