CRAN

alignfigR 0.1.1

Visualizing Multiple Sequence Alignments with 'ggplot2'

Released Jul 5, 2018 by Stephanie J. Spielman

This package is available for Renjin and there are no known compatibility issues.

Dependencies

ggplot2 3.0.0

Create extensible figures of multiple sequence alignments, using the 'ggplot2' plotting engine. 'alignfigr' will create a baseline figure of a multiple sequence alignment which can be fully customized to the user's liking with standard 'ggplot2' features.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>alignfigR</artifactId>
    <version>0.1.1-b2</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:alignfigR')

Test Results

This package was last tested against Renjin 0.9.2689 on Aug 26, 2018.

Source

R

View GitHub Mirror

Release History