CRAN

allelic 0.1

A fast, unbiased and exact allelic exact test

Released May 24, 2006 by Mickael Guedj

This is the implementation in R+C of a new association test described in "A fast, unbiased and exact allelic exact test for case-control association studies" (Submitted). It appears that in most cases the classical chi-square test used for testing for allelic association on genotype data is biased. Our test is unbiased, exact but fast throught careful optimization.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>allelic</artifactId>
    <version>0.1-b249</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:allelic')

Test Results

This package was last tested against Renjin 0.9.2682 on Aug 23, 2018.

• allelic.exact.test-examples
• simple
• test1

Source

View GitHub Mirror

Release History

• 0.1