CRAN

aroma.affymetrix 3.1.0

Analysis of Large Affymetrix Microarray Data Sets

Released Mar 24, 2017 by Henrik Bengtsson [aut, cre, cph], James Bullard [ctb], Kasper Hansen [ctb], Pierre Neuvial [ctb], Elizabeth Purdom [ctb], Mark Robinson [ctb], Ken Simpson [ctb]

This package cannot yet be used with Renjin it depends on other packages which are not available: R.cache 0.12.0, R.oo 1.21.0, R.methodsS3 1.7.1, aroma.apd 0.6.0, aroma.core 3.1.1, R.devices 2.15.1, R.utils 2.6.0, and R.filesets 2.11.0

Dependencies

aroma.apd 0.6.0 R.filesets 2.11.0 R.utils 2.6.0 aroma.core 3.1.1 R.oo 1.21.0 R.cache 0.12.0 R.methodsS3 1.7.1 R.devices 2.15.1 future 1.6.2 MASS 7.3-47 matrixStats 0.52.2 listenv 0.6.0

A cross-platform R framework that facilitates processing of any number of Affymetrix microarray samples regardless of computer system. The only parameter that limits the number of chips that can be processed is the amount of available disk space. The Aroma Framework has successfully been used in studies to process tens of thousands of arrays. This package has actively been used since 2006.