CRAN

asymLD 0.1

Asymmetric Linkage Disequilibrium (ALD) for Polymorphic Genetic Data

Released Jan 30, 2016 by Richard M. Single

This package can be loaded by Renjin but 1 out 2 tests failed.

Computes asymmetric LD measures (ALD) for multi-allelic genetic data. These measures are identical to the correlation measure (r) for bi-allelic data.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>asymLD</artifactId>
    <version>0.1-b22</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

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Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:asymLD')

Test Results

This package was last tested against Renjin 0.8.2427 on Sep 16, 2017.

Source

R

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Release History