CRAN

attfad 1.1

Evaluation and comparison of expression data and GRNs

Released Jun 14, 2013 by Robert Maier

This package can be loaded by Renjin but 2 out 4 tests failed.

This package facilitates evaluation of expression data sets compendia. They can either be based on real data or be the result of a simulation. Some statics make use of a gene regulatory network, on which the expression data is based, and some require the presence of replicates of microarray experiments.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>attfad</artifactId>
    <version>1.1-b259</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

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Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:attfad')

Test Results

This package was last tested against Renjin 0.8.2397 on Jun 8, 2017.

Source

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Release History