CRAN

attfad 1.1

Evaluation and comparison of expression data and GRNs

Released Jun 14, 2013 by Robert Maier

This package can be loaded by Renjin but all tests failed.

This package facilitates evaluation of expression data sets compendia. They can either be based on real data or be the result of a simulation. Some statics make use of a gene regulatory network, on which the expression data is based, and some require the presence of replicates of microarray experiments.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>attfad</artifactId>
    <version>1.1-b256</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:attfad')

Test Results

This package was last tested against Renjin 0.8.2346 on Mar 18, 2017.

Source

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Release History