CRAN

digeR 1.3

GUI tool for analyzing 2D DIGE data

Released Apr 12, 2012 by Yue Fan

This package can be loaded by Renjin but no tests could be found for the package.

Dependencies

randomForest 4.6-6 class 7.3-3 ROCR 1.0-4 ellipse 0.3-7 caTools 1.13 e1071 1.6 MASS 7.3-17 pls 2.3-0 adabag 3.1 gWidgets 0.0-50

An easy to use Graphical User Interfact for spots correlation analysis, score plot, classification, feature selection and power analysis for 2D DIGE experiment data.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>digeR</artifactId>
    <version>1.3-b30</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:digeR')

Source

View GitHub Mirror