CRAN
dna 1.1-1
Differential Network Analysis
Released Mar 22, 2014 by Ryan Gill
This package can be loaded by Renjin but 13 out 20 tests failed.
Package for conducting differential network analysis from microarray data.
Installation
Maven
This package can be included as a dependency from a Java or Scala project by including
the following your project's pom.xml file.
Read more
about embedding Renjin in JVM-based projects.
<dependencies>
<dependency>
<groupId>org.renjin.cran</groupId>
<artifactId>dna</artifactId>
<version>1.1-1-b269</version>
</dependency>
</dependencies>
<repositories>
<repository>
<id>bedatadriven</id>
<name>bedatadriven public repo</name>
<url>https://nexus.bedatadriven.com/content/groups/public/</url>
</repository>
</repositories>
Renjin CLI
If you're using Renjin from the command line, you load this library by invoking:
library('org.renjin.cran:dna')
Test Results
This package was last tested against Renjin 0.9.2644 on Jun 1, 2018.
- PCnet.rd
- PLSnet.rd
- RRnet.rd
- cornet.rd
- gennet.rd
- get.common.networks-methods.rd
- get.modules-methods.rd
- get.network1-methods.rd
- get.network2-methods.rd
- get.results-methods.rd
- modules-class.rd
- network.modules.rd
- pairOfNetworks-class.rd
- resultsClassTest-class.rd
- resultsIndTest-class.rd
- resultsModTest-class.rd
- summary-methods.rd
- test.class.genes.rd
- test.individual.genes.rd
- test.modular.structure.rd