CRAN
genoPlotR 0.8.9
Plot Publication-Grade Gene and Genome Maps
Released Jan 25, 2019 by Lionel Guy
This package can be loaded by Renjin but 7 out 20 tests failed.
Dependencies
Draws gene or genome maps and comparisons between these, in a publication-grade manner. Starting from simple, common files, it will draw postscript or PDF files that can be sent as such to journals.
Installation
Maven
This package can be included as a dependency from a Java or Scala project by including
the following your project's pom.xml file.
Read more
about embedding Renjin in JVM-based projects.
<dependencies>
<dependency>
<groupId>org.renjin.cran</groupId>
<artifactId>genoPlotR</artifactId>
<version>0.8.9-b1</version>
</dependency>
</dependencies>
<repositories>
<repository>
<id>bedatadriven</id>
<name>bedatadriven public repo</name>
<url>https://nexus.bedatadriven.com/content/groups/public/</url>
</repository>
</repositories>
Renjin CLI
If you're using Renjin from the command line, you load this library by invoking:
library('org.renjin.cran:genoPlotR')
Test Results
This package was last tested against Renjin 0.9.2719 on Jan 27, 2019.
- annotation-examples
- apply_color_scheme-examples
- artemisColors-examples
- auto_annotate-examples
- barto-examples
- c.dna_seg-examples
- chrY_subseg-examples
- comparison-examples
- dna_seg-examples
- gene_types-examples
- human_nt-examples
- mauve_bbone-examples
- middle-examples
- plot_gene_map-examples
- range-examples
- read_functions-examples
- reverse-examples
- seg_plot-examples
- three_genes-examples
- trim-examples