CRAN

ggseqlogo 0.1

A 'ggplot2' Extension for Drawing Publication-Ready Sequence Logos

Released Jul 25, 2017 by Omar Wagih

This package can be loaded by Renjin but 1 out 3 tests failed.

Dependencies

ggplot2 3.0.0

The extensive range of functions provided by this package makes it possible to draw highly versatile sequence logos. Features include, but not limited to, modifying colour schemes and fonts used to draw the logo, generating multiple logo plots, and aiding the visualisation with annotations. Sequence logos can easily be combined with other plots 'ggplot2' plots.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>ggseqlogo</artifactId>
    <version>0.1-b14</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

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Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:ggseqlogo')

Test Results

This package was last tested against Renjin 0.9.2687 on Aug 25, 2018.

Source

R

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Release History