CRAN

microPop 1.4.1

Modelling Microbial Populations

Released Apr 26, 2019 by Helen Kettle

This package can be loaded by Renjin but all tests failed. An older version of this package is more compatible with Renjin.

Dependencies

deSolve 1.21

Modelling interacting microbial populations - example applications include human gut microbiota, rumen microbiota and phytoplankton. Solves a system of ordinary differential equations to simulate microbial growth and resource uptake over time.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>microPop</artifactId>
    <version>1.4.1-b1</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:microPop')

Test Results

This package was last tested against Renjin 0.9.2725 on May 4, 2019.

Source

R

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Release History