CRAN

mlPhaser 0.01

Multi-Locus Haplotype Phasing

Released Sep 4, 2012 by Dave T. Gerrard

This package is available for Renjin and there are no known compatibility issues.

Phase haplotypes from genotypes based on a list of known haplotypes. Suited to highly diverse loci such as HLA.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>mlPhaser</artifactId>
    <version>0.01-b245</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:mlPhaser')

Test Results

This package was last tested against Renjin 0.9.2644 on Jun 1, 2018.

Source

View GitHub Mirror

Release History

0.01