CRAN
netgsa 3.1.0
Network-Based Gene Set Analysis
Released Mar 27, 2019 by Jing Ma
This package cannot yet be used with Renjin it depends on other packages which are not available: graphite, graph, msigdbr 6.2.1, dplyr 0.8.0.1, and rlang 0.3.4
An older version of this package is
more compatible with Renjin.
Dependencies
dplyr 0.8.0.1 rlang 0.3.4 msigdbr 6.2.1 glmnet 2.0-16 Matrix 1.2-17 corpcor 1.6.9 igraph 1.2.4.1 quadprog 1.5-6 glassoFast 1.0 magrittr 1.5
Carry out Network-based Gene Set Analysis by incorporating external information about interactions among genes, as well as novel interactions learned from data.