CRAN
neutralitytestr 0.0.2
Test for a Neutral Evolutionary Model in Cancer Sequencing Data
Released May 21, 2018 by Marc Williams
This package cannot yet be used with Renjin it depends on other packages which are not available: dplyr 0.7.5 and ggpmisc 0.2.17
An older version of this package is
more compatible with Renjin.
Dependencies
ggpmisc 0.2.17 dplyr 0.7.5 ggplot2 2.2.1 scales 0.5.0 pracma 2.1.4 cowplot 0.9.2
Package takes frequencies of mutations as reported by high throughput sequencing data from cancer and fits a theoretical neutral model of tumour evolution. Package outputs summary statistics and contains code for plotting the data and model fits. See Williams et al 2016