CRAN

oncomodel 1.0

Maximum likelihood tree models for oncogenesis

Released Oct 29, 2012 by Anja von Heydebreck

Dependencies

ade4 1.7-11

Computing probabilistic tree models for oncogenesis based on genetic data using maximum likelihood.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>oncomodel</artifactId>
    <version>1.0-b239</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:oncomodel')

Test Results

This package was last tested against Renjin 0.9.2635 on Apr 26, 2018.

• MLparameters-examples
• MLtopology-examples
• boot.conf.values-examples
• comp.freq-examples
• is.tree-examples
• leafset.prob-examples
• leafset.prob2-examples
• mrca-examples
• oncomodel-package-examples
• subtree-examples

Source

View GitHub Mirror

Release History

• 1.0