CRAN

treestartr 0.1.0

Generate Starting Trees for Combined Molecular, Morphological and Stratigraphic Data

Released Jan 9, 2019 by April Wright

Dependencies

ape 5.2 phytools 0.6-60

Combine a list of taxa with a phylogeny to generate a starting tree for use in total evidence dating analyses.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>treestartr</artifactId>
    <version>0.1.0-b1</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:treestartr')

Test Results

This package was last tested against Renjin 0.9.2719 on Jan 12, 2019.

• echo_rb-examples
• echo_subtree-examples
• genera_strippR-examples
• get_found-examples
• get_lost-examples
• make_absentdf-examples
• present_tippR-examples
• rand_absent_tippR-examples
• testthat
• text_placR-examples

Source

View GitHub Mirror

Release History

• 0.1.0