BioConductor

ARRmData 1.16.0

Example dataset for normalization of Illumina 450k Methylation data

Released May 1, 2018 by Jean-Philippe Fortin

This package is available for Renjin and there are no known compatibility issues.

Raw Beta values from 36 samples across 3 groups from Illumina 450k methylation arrays

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>ARRmData</artifactId>
    <version>1.16.0-b2</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:ARRmData')

Test Results

This package was last tested against Renjin 0.9.2644 on Jun 1, 2018.