BioConductor

Illumina450ProbeVariants.db 1.16.0

Annotation Package combining variant data from 1000 Genomes Project for Illumina HumanMethylation450 Bead Chip probes

Released Oct 7, 2013 by Tiffany Morris

This package is available for Renjin and there are no known compatibility issues.

Includes details on variants for each probe on the 450k bead chip for each of the four populations (Asian, American, African and European)

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>Illumina450ProbeVariants.db</artifactId>
    <version>1.16.0-b2</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:Illumina450ProbeVariants.db')

Test Results

This package was last tested against Renjin 0.9.2687 on Aug 24, 2018.

Source

Release History