BioConductor

affyPara 1.40.0

Parallelized preprocessing methods for Affymetrix Oligonucleotide Arrays

Released Mar 25, 2013 by Markus Schmidberger

This package is available for Renjin and there are no known compatibility issues.

Dependencies

vsn 3.48.1 affy 1.58.0 aplpack 1.3.2 affyio 1.50.0 snow 0.4-2

The package contains parallelized functions for exploratory oligonucleotide array analysis. The package is designed for large numbers of microarray data.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>affyPara</artifactId>
    <version>1.40.0-b2</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:affyPara')

Test Results

This package was last tested against Renjin 0.9.2687 on Aug 25, 2018.