BioConductor

aracne.networks 1.6.0

ARACNe-inferred gene networks from TCGA tumor datasets

Released May 1, 2018 by Federico M. Giorgi

This package is available for Renjin and there are no known compatibility issues.

Dependencies

This package contains ARACNe-inferred networks from TCGA tumor datasets. It also contains a function to export them into plain-text format.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.bioconductor</groupId>
    <artifactId>aracne.networks</artifactId>
    <version>1.6.0-b1</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.bioconductor:aracne.networks')

Test Results

This package was last tested against Renjin 0.9.2643 on May 4, 2018.