CRAN

Ac3net 1.2.2

Inferring Directional Conservative Causal Core Gene Networks

Released Feb 26, 2018 by Gokmen Altay

Dependencies

data.table 1.10.4-3

Infers directional conservative causal core (gene) networks. It is an advanced version of the algorithm C3NET by providing directional network. Gokmen Altay (2018) , bioRxiv.

Installation

Maven

This package can be included as a dependency from a Java or Scala project by including the following your project's pom.xml file. Read more about embedding Renjin in JVM-based projects.

<dependencies>
  <dependency>
    <groupId>org.renjin.cran</groupId>
    <artifactId>Ac3net</artifactId>
    <version>1.2.2-b2</version>
  </dependency>
</dependencies>
<repositories>
  <repository>
    <id>bedatadriven</id>
    <name>bedatadriven public repo</name>
    <url>https://nexus.bedatadriven.com/content/groups/public/</url>
  </repository>
</repositories>

View build log

Renjin CLI

If you're using Renjin from the command line, you load this library by invoking:

library('org.renjin.cran:Ac3net')

Test Results

This package was last tested against Renjin 0.9.2622 on Apr 7, 2018.

• Ac3net-examples
• Ac3net.MTC-examples
• Ac3net.commonlinks-examples
• Ac3net.cutoff-examples
• Ac3net.filtersames-examples
• Ac3net.getDifferentLinks-examples
• Ac3net.getDirectedOrDualLinks-examples
• Ac3net.maxmim-examples
• Ac3net.performance-examples
• expdata-examples
• truenet-examples
• zeroindx-examples

Source

View GitHub Mirror

Release History

• 1.2.2