CRAN

INSPIRE 1.5

Inferring Shared Modules from Multiple Gene Expression Datasets with Partially Overlapping Gene Sets

Released Dec 9, 2016 by Safiye Celik

This package cannot yet be used with Renjin it depends on other packages which are not available: missMDA 1.13

Dependencies

missMDA 1.13

A method to infer modules of co-expressed genes and the dependencies among the modules from multiple expression datasets that may contain different sets of genes. Please refer to: Extracting a low-dimensional description of multiple gene expression datasets reveals a potential driver for tumor-associated stroma in ovarian cancer, Safiye Celik, Benjamin A. Logsdon, Stephanie Battle, Charles W. Drescher, Mara Rendi, R. David Hawkins and Su-In Lee (2016) .

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