CRAN
attfad 1.1
Evaluation and comparison of expression data and GRNs
Released Jun 14, 2013 by Robert Maier
This package facilitates evaluation of expression data sets compendia. They can either be based on real data or be the result of a simulation. Some statics make use of a gene regulatory network, on which the expression data is based, and some require the presence of replicates of microarray experiments.
Installation
Maven
This package can be included as a dependency from a Java or Scala project by including
the following your project's pom.xml file.
Read more
about embedding Renjin in JVM-based projects.
<dependencies>
<dependency>
<groupId>org.renjin.cran</groupId>
<artifactId>attfad</artifactId>
<version>1.1-b273</version>
</dependency>
</dependencies>
<repositories>
<repository>
<id>bedatadriven</id>
<name>bedatadriven public repo</name>
<url>https://nexus.bedatadriven.com/content/groups/public/</url>
</repository>
</repositories>
Renjin CLI
If you're using Renjin from the command line, you load this library by invoking:
library('org.renjin.cran:attfad')
Test Results
This package was last tested against Renjin 0.9.2644 on Jun 1, 2018.