Synthesizing Information Across Collaborating Research

Thermophysical Properties of Water and Steam

The Irvine Robustness Assessment for Qualitative Comparative Analysis

Model Selection for Index of Asymmetry Distribution

iASeq: integrating multiple sequencing datasets for detecting allele-specific events

Cleaning and Visualizing Implicit Association Test (IAT) Data

Scoring Algorithm for the Implicit Association Test (IAT)

Integrative Bayesian Analysis of Transcriptomic and CGH Data

Iterative Binary Biclustering of Genesets

INCOMPLETE BLOCK DESIGNS

Functions for the Analysis of IBD Haplo Output

Regression Methods for IBD Linkage With Covariates

Simulation of Chromosomal Regions Shared by Family Members

Irregular-lattice based ensemble empirical mode decomposition

Belief Function Implementation

Interaction Based Homogeneity for Evaluating Gene Lists

Approximation using the IBHM method

Individual Based Models in R

Toolkits to Develop Individual-Based Models in Infectious Disease

IBM in-Database Analytics for R

integrated Bayesian Modeling of eQTL data

Iboot: iterated bootstrap tests and confidence sets.

Iterative Bias Reduction

R API to Interactive Brokers Trader Workstation

Improper Bagging Survival Tree

An Interface to WinBUGS/OpenBUGS/JAGS by gWidgets

Inequality constrained inference in linear normal situations

A Copy Number and Expression-Based Classifier for Breast Tumours

Training datasets for iC10 package.

Inequality and Concentration Indices and Curves

Standardized high-throughput evaluation of cell-based compound screens

Independent Component Analysis

Estimation of ICA Mixture Models

Independent Components Analysis (ICA) based artifact correction.

Imperialist Competitive Algorithm for Optimal Designs

Mixed ICA/PCA

A Tool for Individualized Coherent Absolute Risk Estimation (iCARE)

Calibrates and Reweights Units in Samples

Bayesian Semiparametric Models for Interval-Censored Data

Facilitating Estimation of the Intraclass Correlation Coefficient

Calculation of Sample Size and Power for ICC

Multilevel Model Intraclass Correlation for Slope Heterogeneity

Facilitates Clustered Binary Data Generation, and Estimation of Intracluster Correlation Coefficient (ICC) for Binary Data

Tools for Working with ICD-9 and ICD-10 Codes, and Finding Comorbidities

Tools for Working with ICD-9 Codes, and Finding Comorbidities

EM by the Method of Weights for Incomplete Categorical Data in Generlized Linear Models

Iterated Conditional Expectation

Individual Conditional Expectation Plot Toolbox

Incremental Cost-Effectiveness (ICE) Statistical Inference from Two Unbiased Samples

Regression Models for Interval Censored Data

NPMLE for Censored and Truncated Data

Study Design and Data Analysis in the Presence of Error-Prone Diagnostic Tests and Self-Reported Outcomes

Functions Related to ICES Advice

DATRAS Trawl Database Web Services

Stock Assessment Graphs Database Web Services

ICES Vocabularies Database Web Services

Estimation of number of clusters and identification of atypical units

Fit Generalized Odds Rate Hazards Model with Interval Censored Data

QC Pipeline and Data Analysis Tools for High-Dimensional Illumina mRNA Expression Data

Bayesian Modeling of ChIP-chip Data Through Hidden Ising Models

A Button-Based GUI for Financial and Economic Data Analysis

Integrative clustering of multiple genomic data types

Integrative clustering of multi-type genomic data

Comparison and Visualization of Ranking and Assignment Methods

ICOMP criterion

Global Triangular and Penta-Hexagonal Grids Based on Tessellated Icosahedra

Reproducible Data Retrieval from the ICPSR Archive

A Modified Random Survival Forest Algorithm

Tools for Exploring Multivariate Data via ICS/ICA

Tools for Multivariate Nonparametrics

Outlier Detection Using Invariant Coordinate Selection

A package for semiparametric regression analysis of interval-censored data

Inverse Compliance Score Weighting

Estimating and Testing the Number of Interesting Components in Linear Dimension Reduction

Indirect Cross-Validation (ICV) for Kernel Density Estimation

R debugger

R Interface to the US Census Bureau International Data Base API

Inference in Randomized Controlled Trials with Death and Missingness

Interactive Dendrograms

Clean Unique Identifiers

Jacquard Condensed Coefficients of Identity

Plots data (continuous/discrete) along chromosomal ideogram

Various Methods for Estimating Intrinsic Dimension

idiogram

Incremental Decomposition Methods

ID Mapping Analysis

ID Mapping Data Retrieval

Intrinsic Dimension for Data Mining

Integrated Discovery of Oncogenic Signatures

Utilities of Institute of Data Analyses and Process Design (www.idp.zhaw.ch)

Imprecise Dirichlet Process for Survival Analysis

Irreproducible discovery rate

Generate Random Identifiers

Estimate Global Clustering in Infectious Disease

Identify Turtles by their Plastral Biometries

R Analysis package for iDynoMiCS Simulation Results

Irucka Embry's Miscellaneous USGS Functions

Irucka Embry's Miscellaneous USGS Data Collection

Functions to set and get the IEEE rounding mode

Irucka Embry's Miscellaneous Functions

Irucka Embry's Miscellaneous Data Collection

Irucka Embry's Miscellaneous Text Collection

Independent Factor Analysis

An integrative factor analysis model for drug-pathway association inference

Toolkit for Item Factor Analysis with 'OpenMx'

Italian Fiscal Code ('Codice Fiscale') Utilities

Identifying Functional Polymorphisms

Iterated Function Systems

Insightful Research Tools

Instagram 2014 Vancouver Top Colour Dataset

Statistical Tests and Utilities for Genetic Association

An integrated analysis package of Gene expression and Copy number alteration

Tool for sending interactive bioinformatic heatmaps with tool-tip content.

IGM MEA Analysis

Read Binary Files Saved by 'Igor Pro' (Including 'Neuromatic' Data)

Network Analysis and Visualization

Network analysis and visualization, old, deprecated package.

A Collection of Network Data Sets for the 'igraph' Package

Use 'shiny' to Demo 'igraph'

Convert iGraph graps to SoNIA .son files

Inhomogeneous Self-Exciting Process

Independent Hypothesis Weighting

Reproduce figures in IHW paper

iid-test

Integrative Joint Random Forest

Consistency, Homogeneity and Summary Statistics of Climatological Data

Improved Laplace Approximation for Integrals of Unimodal Functions

Lee-Carter Mortality Models using Iterative Fitting Algorithms

Annotation Package combining variant data from 1000 Genomes Project for Illumina HumanMethylation450 Bead Chip probes

Illumina microarray files (IDAT) for testing

Illumina Illumina Human Methylation 27k annotation data (chip IlluminaHumanMethylation27k)

Annotation for Illumina's 27k methylation arrays

Annotation for Illumina's 450k methylation arrays

Probe sequence data for microarrays of type IlluminaHumanMethylation450k

Manifest for Illumina's EPIC methylation arrays

Illumina HumanWG6v1 annotation data (chip illuminaHumanv1)

Illumina HumanWG6v2 annotation data (chip illuminaHumanv2)

Illumina HumanWGv2 annotation data (chip illuminaHumanv2BeadID)

Illumina HumanHT12v3 annotation data (chip illuminaHumanv3)

Illumina HumanHT12v4 annotation data (chip illuminaHumanv4)

Illumina HumanHT12WGDASLv3 annotation data (chip illuminaHumanWGDASLv3)

Illumina HumanWGDASLv4 annotation data (chip illuminaHumanWGDASLv4)

Parsing Illumina Microarray Output Files

Illumina MouseWG6v1 annotation data (chip illuminaMousev1)

Illumina MouseWG6v1p1 annotation data (chip illuminaMousev1p1)

Illumina MouseWG6v2 annotation data (chip illuminaMousev2)

Illumina Ratv1 annotation data (chip illuminaRatv1)

Interlaboratory Study

Orthogonal Moment Analysis

Aids in Processing and Plotting Data from a Lemna-Tec Scananalyzer

Analysis of high-throughput microscopy-based screens

Image Processing Library Based on 'CImg'

Imaging Engine, Tools for Application of Image Filters to Data Matrices

Item Maker

Interactive Mapping

Methods for Mediation Analysis

Send 'iMessages' from R

A graphical interface for the metagene package

R Interface for International Monetary Fund(IMF) Data API

Download Data from the International Monetary Fund's Data API

An Imgur.com API Client Package

Fitting, Diagnostics, and Plotting Functions for Infinite Mixtures of Infinite Factor Analysers and Related Models

Increamental Mixture Importance Sampling

Item Response Models for Multiple Ratings

A Thin Wrapper around the ImmuneSpace Database

immunoClust - Automated Pipeline for Population Detection in Flow Cytometry

Interactive Model Performance Evaluation

Imputation for Proteomics

The Impact of Items

Identifying Causal Effect for Multi-Component Intervention Using Instrumental Variable Method

Retrieves data from IMPC database

R Interface for Apache Impala

Imprecise Inference for Poisson Sampling Models

An Import Mechanism for R

Import and Export Data

Minimum distance estimation in an imprecise probability model

imputation

impute: Imputation for microarray data

A collection of methods for left-censored missing data imputation

The Multifactor Dimensionality Reduction (MDR) Analysis for Incomplete Data

Impute Missing Values in a Predictive Context

Imputation Methods for Multivariate Multinomial Data

Impute Missing Data in Time Series Data with PSF Based Method

A General Imputation Framework in R

Robust Multiple Imputation with Generalized Additive Models for Location Scale and Shape

Test Bench for the Comparison of Imputation Methods

Time Series Missing Value Imputation

Imputing the Last Largest Censored Observation(s) Under Weighted Least Squares

Information Matrix Test for Generalized Partial Credit Models

Into the extRemes Package

Mixture models for longitudinal count data.

Analysing Inbreeding Based on Genetic Markers

Integer Calibration

Recognize and Handle Data in Formats Used by Swedish Cancer Centers

Compute, Handle, Plot and Model Incidence of Dated Events

Incremental Multivariate Regression

Incidence Estimation Tools

Dose Response Curves from Incucyte Proliferation Assays

INDAC FlyChip_long_oligonucleotide_002 (FL002) annotation data (chip indac)

Insertion Deletion Analysis While Accounting for Possible Missing Data

Nonparametric tests of independence between random vectors.

Indian Income Tax Calculator

A simple R Wrapper for the indico set of APIs - http://indico.io

Relationship Between Species and Groups of Sites

Tests of Independence Between Point Processes in Time

Integrate INEGI’s (Mexican Stats Office) API with R

Measuring Inequality, Concentration, and Poverty

Interpolation and Extrapolation for Species Diversity

Interpolation and Extrapolation for Phylogenetic Diversity

Infine-dimensional model (IDM) to analyse phenotypic variation in growth trajectories.

Functions to extract inferential values of a fitted model object

Inference about the standardized mortality ratio when evaluating the effect of a screening program on survival.

Methods for Causal Inference with Interference

Inferential Statistics

Estimate and Account for Tumor Purity in Cancer Methylation Data Analysis

Finds the Inflection Point of a Curve

Tools for detecting influential data in mixed effects models

Case Influence in Structural Equation Models

Software Tools to Quantify Structural Importance of Nodes in a Network

Information Decomposition of Two-Phase Experiments

Data Exploration with Information Theory (Weight-of-Evidence and Information Value)

Performance Analysis and Companion Functions for Binary Classification Models

Multiple Imputation for Informative Censoring

R Tools for Creating Sequence Statistics

Information-Theoretic Measures

Calculates the Probability of Informed Trading (PIN)

IO Help for infraFDTD Model

A Very Basic Templating Engine

Inference Using Simulation

Information Utility

Read and Write '.ini' Files

R Dependency Injection

Bayesian Model Averaging with INLA

Functions to Inline C, C++, Fortran Function Calls from R

Convert inline comments to documentation

Miscellaneous Functions for the USGS INL Project Office

Identification of Novel alternative PolyAdenylation Sites (PAS)

Analyse Text Documents Using Ecological Tools

Inference Tests for ExPosition

An R package for computing the number of susceptibility SNPs

insideRODE includes buildin functions with deSolve solver and C/FORTRAN interfaces to nlme, together with compiled codes.

Access to the InSilico Database

Collection of Merging Techniques for Gene Expression Data

Probabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm

Solar Radiation

Analysis of 4sU-seq and RNA-seq time-course data

High-Dimensional Changepoint Estimation via Sparse Projection

Perform Basic Checks of Dataframes

Inferring Shared Modules from Multiple Gene Expression Datasets with Partially Overlapping Gene Sets

Check, Install and Load CRAN & USGS GRAN Packages

Using R to Install Stuff (Such As: R, 'Rtools', 'RStudio', 'Git', and More!)

Access to Instagram API via R

A Collection of Insurance Datasets Useful in Risk Classification in Non-life Insurance.

64 bit integer types

Procedures for Automated Interpolation

procedures for automated interpolation - methods only to be used interactively, not included in intamap package

Integrative analysis of structural variations

Integrated Data Analysis via Clustering

Iterated Convex Minorant Algorithm for interval censored event data

Integration for B-Spline

Joint Modeling of the Gene-Expression and Bioassay Data, Taking Care of the Effect Due to a Fingerprint Feature

Integrated Prediction using Univariate and Multivariate Random Forests

end of integrOmics package

Tests for marginal interactions in a 2 class response model

Base Classes for Storing Genomic Interaction Data

Calculates Critical Test Statistics to Control False Discovery and Familywise Error Rates in Marginal Effects Plots

Package for enabling powerful shiny web displays of Bioconductor objects

Base package for enabling powerful shiny web displays of Bioconductor objects

interactive network analysis and visualization.

toggle R interactive mode.

interAdapt

Compute Chi-Square Measures with Corrections

Cure Rate Estimators for Interval Censored Data

GUI to Analyse qPCR Results after PMA Treatment or not

Multiplicative Interaction Models Diagnostics and Visualization

Coercion Routines for Network Data Objects

An API Client for the Internet Archive

Plot the Effects of Variables in Interaction Terms

Interpolation of amino acid sequences

Hourly interpolation of multiple temperature daily series

Interpreting High Resolution GC-APCI-MS Spectra

Binary Classifier and Regression Model Interpretation Functions

Simulation of Inter-Related Genomic Datasets

Replicate and Analyse 'InterVA4'

Weighted Logrank Tests and NPMLE for interval censored data

Tools for Working with Points and Intervals

Interventional Inference for Dynamic Bayesian Networks

Numerical Integration for Integrated Likelihood

Integrative Clustering of Multiple Genomic Dataset

linear programming solver by the interior point method and graphically (two dimensions)

Interpret Tree Ensembles

Interval Regression

Integrated Regression Goodness of Fit

methods for analyzing introgression between divergent lineages

Relational Operators for Intervals

International Assessment Data Manager

Interface to Popular R Functions for Data Science Pipelines

Interval and Enum-Type Representation of Vectors

Invariant Causal Prediction

Invasion Correction

Inventory Models

Inventorymodel

Inversions in genotype data

Inverse Estimation/Calibration Functions

The Inverse Gamma Distribution

Threshold regression that fits the (randomized drift) inverse Gaussian distribution to survival data.

Inversion of Laplace-Transformed Functions

A Unified Framework for Input-Output Operations in R

Calling Copy Number Alterations in Amplicon Sequencing Data

Calculate the Number of Required Flows for Semiconductor Sequencing

'Ionicons' Icon Pack

Quality Assessment Tools for Oxford Nanopore MinION data

Test for Indifference of Indicator

Data management and analysis of ion trees from ion-trap mass spectrometry

Data provided to show the usage of functions in iontree package

Methods for Industrial/Organizational Psychology

Functions for Smoothing with Infinite Order Flat-Top Kernels

I/O Tools for Streaming

Identification of Protein Amino acid Clustering

Tools for subgroup analyses with multiple trial data using aggregate statistics

Spatial Interpolation by Inverse Path Distance Weighting

Integrative Lasso with Penalty Factors

Fast Implementation of the Iterative Proportional Fitting Procedure in C

Indoor Positioning Fingerprinting Toolset

iPlots - interactive graphics for R

Builds and analyses Integral Projection Models (IPMs).

Isotopic peak pattern deconvolution for Protein Mass Spectrometry by template matching

Improved Predictors

Linear Regression using I-Priors

Interfaces to Phylogenetic Software in R

Introduction to Probability and Statistics Using R

Convert IP Addresses to Country Names or Full Location with Geoplotting

Manipulate, Validate and Resolve 'IP' Addresses

Estimate Inverse Probability Weights

Propensity Score Based Adjusted Survival Curves and Corresponding Log-Rank Statistic

Improved Quality Control Charts

Interactive Q-Learning

Generate Chemical Strings (SMILES) with the Inverse QSPR Model

Iterated Racing for Automatic Algorithm Configuration

Integrative Random Forest for Gene Regulatory Network Inference

Infrastructure for manipulating intervals on sequences

A R Interface for the Instantaneous RATEs (IRATE) Model

'Jupyter' Display Machinery

iRefIndex Manager

Regression methods for interval-valued variables

Reproducibility for Interval-Censored Data

Irish Companies' Boards from 2003 to 2013

Statistics and Metrics for Seismic Data

Classes and Methods for Seismic Data Analysis

Fast Truncated SVD, PCA and Symmetric Eigendecomposition for Large Dense and Sparse Matrices

Various Coefficients of Interrater Reliability and Agreement

Item Response Theory Demo Collection

A Collection of Functions Related to Item Response Theory (IRT)

Estimating IRT Parameters using the IRT Methodology

Utilities and Probability Distributions Related to Multidimensional Person Item Response Models

Estimation of Tree-Based Item Response Models

Item Response Theory via Shiny

The Iterative Signature Algorithm

Iterative Selection of Blocks of Features - ISBF

image-based High-Throughput RNAi Screening Analysis Tool

interval symbolic data analysis for R

Provides datasets for Introduction to Statistical Data Analysis for the Life Sciences

Invasive Species Distribution Modelling

Parse 'NOAA' Integrated Surface Data Files

Bayesian Hierarchical Modeling of ChIP-seq Data Through Hidden Ising Models

Fitting Ising Models Using the ELasso Method

Monte Carlo for Classical Ising Model

Sampling Methods and Distribution Functions for the Ising Model

ISIPTA network analysis

Stochastic Island Biogeography Theory Made Easy

Data for An Introduction to Statistical Learning with Applications in R

An Introduction to Statistical Modeling of Extreme Values

Functions to Perform Isotonic Regression

Analysis and quantitation of isobarically tagged MSMS proteomics data

Confidence intervals for current status data based on transformations and bootstrap.

Isotonic Inference for Circular Data

Selected ISO Codes

Order-Restricted Inference for Microarray Experiments

A graphical user interface to conduct a dose-response analysis of microarray data

Integrative Statistics of alleLe Dependent Expression

Analyze isomiRs and miRNAs from small RNA-seq

Isopam (Clustering)

Calculation of isotopic pattern for a given molecular formula

Isotonic Proportional Hazards Model

Statistical Toolbox for Radiometric Geochronology

Deconvolution of Tumour Profiles

Isoscape Computation and Inference of Spatial Origins using Mixed Models

The IsoSpec Algorithm

Active Set and Generalized PAVA for Isotone Optimization

Penalized Isotonic Regression in one and two dimensions

Stable Isotope Mixing Model

Week of the year and weekday according to ISO 8601

Iterative Sequential Regression

The package can implement the graph-based reconstruction and analyses of the KEGG pathways.

Independent Surrogate Variable Analysis

Introductory Statistics with R

ITALICS

Item Analysis for Multiple Choice Tests

Individual Tree Crowns Segmentation

Classical Item Analysis

Parametric rate comparison

The Iterative Bayesian Model Averaging (BMA) algorithm

The Iterative Bayesian Model Averaging (BMA) Algorithm For Survival Analysis

Provides Iterator Construct for R

Approximate probability densities by iterated Laplace Approximations

Efficient Iterator for Permutations and Combinations

Iterator Tools

itertools2: Functions creating iterators for efficient looping

Individual Tree Growth Modeling

Tools for classification and regression trees, with an emphasis on interpretability.

Irregular Time Series

Interpreting Time Series and Autocorrelated Data Using GAMMs

Time series analysis package for students

Incorporating Uncertainties in Propensity Scores

Identification of genetic Variants affecting Alternative Splicing

Bayesian Instrumental Variable Estimation and Model Determination via Conditional Bayes Factors

Instrumental fixed effect panel data model

A Data Analysis Tool for In Vitro-In Vivo Correlation (IVIVC)

Uses heteroscedasticity to estimate mismeasured and endogenous regressor models

Statistical Inference and Sensitivity Analysis for Instrumental Variables Model

Instrumental Variable Estimation.

Instrumental variables probit model

Interactive web-based plots

Improved methods for causal inference and missing data problems

Wavelet-Based Index of Storm Activity

Numerical evaluation willingness to pay based on interval data

exprSets for Iyer, Eisen et all 1999 Science paper