Data sets and functions with "Analyzing Linguistic Data: A practical introduction to statistics".
Laplace Deconvolution with Noisy Discrete Non-Equally Spaced Observations on a Finite Time Interval
L1 regularized regression (Lasso) solver using the Cyclic Coordinate Descent algorithm aka Lasso Shooting
Efficient Estimation of Discrete-Time Multivariate Frailty Model Using Exact Likelihood Function for Grouped Survival Data
A Tool for Selecting Genes Related to Survival Outcomes using Longitudinal Gene Expression Data
Finds "Local Subnetworks" Within an Interaction Network which Show Enrichment for Differentially Expressed Genes
Constructing Gene Co-Expression Networks for Single-Cell RNA-Sequencing Data Using Pseudotime Ordering
Functions and datasets to accompany the book "Le logiciel R: Maitriser le langage, Effectuer des analyses statistiques" (french)
Utilities for Formatting Strings with Consistent Capitalization, Word Breaks and White Space
Tests for Genetic Association/Gene-Environment Interaction in Longitudinal Gene-Environment-Wide Interaction Studies
Fast and Accurate Evaluation, Random Number Generation and Parameter Estimation of Skew Stable Distributions
Selected data from the HiC paper of E. Lieberman-Aiden et al. in Science (2009)
Wavelet Lifting Estimators of the Hurst Exponent for Regularly and Irregularly Sampled Time Series
Compute the Personalized Activity Index Based on a Flexible Bayesian Negative Binomial Model
LMGene Software for Data Transformation and Identification of Differentially Expressed Genes in Gene Expression Arrays
Long Non-Coding RNA Identification Based on Features of Sequence, EIIP and Secondary Structure
Compute MLE of Log-Concave Density on R with Fixed Mode, and Perform Inference for the Mode.
loop decomposition of weighted directed graphs for life cycle analysis, providing flexbile network plotting methods, and analyzing food chain properties in ecology
A correction of the local pooled error (LPE) method to replace the asymptotic variance adjustment with an unbiased adjustment based on sample size.
Survival Trees to Fit Left-Truncated and Right-Censored and Interval-Censored Survival Data
An Automated Approach to Evaluating Dose-Effect Experiments Following Litchfield and Wilcoxon (1949)