Sparse Generalized Linear Model with L0 Approximation for Feature Selection

Deconvolution for LINCS L1000 Data

Routines for L1 Estimation

l2boost - Friedman's boosting algorithm for regularized linear regression

Ordination and Multivariate Analysis for Ecology

Relabelling MCMC Outputs of Mixture Models

Labeled Loop

Axis Labeling

Manipulating Labelled Data

Predicting Rankings of Labels

Convert labels or tables to a dendrogram

Identification, Tuning, Visualisation and Analysis of Labour Market Areas

Libreria Del Laboratorio Di Statistica Con R

Data Sets for the Book "Experimental Design for Laboratory Biologists"

Estimation of indicators on social exclusion and poverty

Duncan test, Tukey test and Scott-Knott test.

Fast Access to Large ASCII Files

Local Approximate Gaussian Process Regression

Sean 'Lahman' Baseball Database

Tools for the Analysis of Ecosystem Metabolism

Lake Morphometry Metrics in R

Modeling Data with Functional Programming

Tools for Modeling Data with Functional Programming

Collection of Internal Consistency Reliability Coefficients.

Probabilistic Models to Analyze and Gaussianize Heavy-Tailed, Skewed Data

Lambert-W Function

Surveys of Iraq Mortality Published in The Lancet

Liquid Association for Network Dynamics Detection

Landmark Estimation of Survival and Treatment Effect

Landmark Prediction of a Survival Outcome

Radiometric and topographic correction of satellite imagery

Landsat 8 Imagery Rescaled to Reflectance, Radiance and/or Temperature

Categorical Landscape Simulation Facility

Langevin Analysis in One and Two Dimensions

Access the 'languagelayer' API

Data sets and functions with "Analyzing Linguistic Data: A practical introduction to statistics".

Laplace Deconvolution with Noisy Discrete Non-Equally Spaced Observations on a Finite Time Interval

Complete Environment for Bayesian Inference

Laplace Mixture Model in Microarray Experiments

A package containing metadata for LAPOINTE arrays

History of labour relations package

Local Average Response Functions for Instrumental Variable Estimation of Treatment Effects

Serialization Interface for Large List Objects

Large Regressions

High-Quality Visualizations of Large, High-Dimensional Datasets

Least Angle Regression, Lasso and Forward Stagewise

Likelihood Analysis of Speciation/Extinction Rates from Phylogenies

L1 constrained estimation aka `lasso'

Modelling Interactions in High-Dimensional Data with Backtracking

Nonparametric P-Value Estimation for Predictors in Lasso

High-Dimensional Inference with the Penalized Score Test

L1 regularized regression (Lasso) solver using the Cyclic Coordinate Descent algorithm aka Lasso Shooting

A Simple Wrapper for the LASVM Solver

Draws Diagrams Useful for Checking Latent Scales

Latent Position and Cluster Models for Statistical Networks

Item Response Theory Implemented in R and Cpp

Functions to Calculate Common Laterality Statistics in Primatology

Use LaTeX Expressions in Plots

Trellis Graphics for R

Density estimation and nonparametric regression on irregular regions

Extra Graphical Utilities Based on Lattice

Multiresolution Kriging Based on Markov Random Fields

A graphical user interface for exploratory visualisation

Latent Variable Models

Latent Variable Models with Censored and Binary Outcomes

Latent Variable Analysis

Latent Variable Analysis with Shiny

Complex Survey Structural Equation Modeling (SEM)

Client for 'Turfjs' for 'Geospatial' Analysis

Tools for Biostatistics, Public Policy, and Law

Lazy Learning for Local Regression

A LazyData Facility

Lazy (Non-Standard) Evaluation

Render R Markdown Outputs Lazily

Lazy SQL Programming

LaTeX Wrappers for R Users

Latent Budget Analysis for Compositional Data

Estimation of the false discovery rate.

Limited-memory BFGS Optimization

Length-biased correction to survival curve estimation.

Log-Binomial Regression with Constrained Optimization

Length-Based Spawning Potential Ratio

Localised Co-Dependency Analysis

Latent Class Analysis (LCA) with familial dependence in extended pedigrees

Learn Chain graphs via Decomposition

Latent Class Discriminant Analysis

Linear Combination Fitting

Data sets for package ``LMERConvenienceFunctions''

Efficient Estimation of Discrete-Time Multivariate Frailty Model Using Exact Likelihood Function for Grouped Survival Data

Bayesian Nonparametric Latent-Class Capture-Recapture

Extended Mixed Models Using Latent Classes and Latent Processes

lcmr package

Liouville Copulas

Local Correlation, Spatial Inequalities, Geographically Weighted Regression and Other Tools

Collapsed Gibbs Sampling Methods for Topic Models

Selection of Statistically Similar Research Groups

Tuning of the Latent Dirichlet Allocation Models Parameters

Interactive Visualization of Topic Models

Local Density-Based Outlier Detection

Lan-DeMets Method for Group Sequential Boundaries

Linkage disequilibrium corrected by the structure and the relatedness

Design of experiments for detection of linkage disequilibrium

Link Function and Distribution Diagnostic Test for Social Science Researchers

Efficient Whole-Genome LD Based Haplotpe Block Recognition

Graphical Display of Pairwise Linkage Disequilibria Between SNPs

Hidden Markov Model for Return Time-Series Based on Lambda Distribution

LD LASSO Regression for SNP Association Study

Finding Locally D-optimal optimal designs for some nonlinear and generalized linear models.

Methods for likelihood-based dimension reduction in regression

Tools for Linear Dimension Reduction

Exact tests for Linkage Disequilibrium and Hardy-Weinberg Equilibrium

LEA: an R package for Landscape and Ecological Association Studies

Analysis and Visualization of Plant Leaf Angle Distributions

Rapid Digital Image Analysis of Leaf Area

Create Interactive Web Maps with the JavaScript 'Leaflet' Library

Minicharts for Interactive Maps

An R Gallery for China and Other Geojson Choropleth Map in Leaflet

Interactive Web-Maps Based on the Leaflet JavaScript Library

Finds "Local Subnetworks" Within an Interaction Network which Show Enrichment for Differentially Expressed Genes

Constructing Gene Co-Expression Networks for Single-Cell RNA-Sequencing Data Using Pseudotime Ordering

Likelihood Estimation of Admixture in Parents From Offspring Genotypes

latent effect adjustment after primary projection

Regression Subset Selection

Border and Area Estimation of Data Measured with Additive Error

Functions for Learning Bayesian Inference

Functions for Learning Exploratory Data Analysis

An Implementation of Crawford's and Wright's Learning Curve Production Functions

Data and functions to accompany the book "Learning R".

Examples of Neural Networks

An Interactive Environment for Learning Statistics

Learning from DNA to Predict Enhancers

leeBamViews -- multiple yeast RNAseq samples excerpted from Lee 2009

Phylogenetic and Functional Analyses for Ecology

Latent Environmental & Genetic InTeraction (LEGIT) Model

Bivariate Linear Errors-In-Variables Estimation

Functions and datasets to accompany the book "Le logiciel R: Maitriser le langage, Effectuer des analyses statistiques" (french)

Laplace approximated EM Microarray Analysis

A Lending Club API Wrapper

Generate 'Lero Lero' Quotes

Identifying Differential Effects in Tiling Microarray Data

Less Code, More Results

A package for LEarning STATistics

Tools for Data Handling and Analysis in Macroecology

Utilities for Formatting Strings with Consistent Capitalization, Word Breaks and White Space

Leukemia's microarray gene expression data (expressionSet).

Lexicons for Text Analysis

Plot Lexis Diagrams for Demographic Purposes

Extractive Summarization of Text with the LexRank Algorithm

Logistic Factor Analysis for Categorical Data

Factors with Levels

Local Fisher Discriminant Analysis

Estimation of the Local False Discovery Rates by Type II Maximum Likelihood Estimation

Linear Group Fixed Effects

Linguistic Fuzzy Logic

Calculation of Low Flow Statistics for Daily Stream Flow Data

Tools for linear grouping analysis (LGA)

Simulation and Estimation of Log-GARCH Models

Log-Gaussian Cox Process

Tests for Genetic Association/Gene-Environment Interaction in Longitudinal Gene-Environment-Wide Interaction Studies

Set-Based Tests for Genetic Association in Longitudinal Studies

simulating Linkage Group Selection (LGS)

A Set of Methods for Longitudinal Data Objects

Latin Hypercube Samples

Computational Routines for Proton and Ion Radiotherapy

Linear Test Statistics for Permutation Inference

Linear Predictive Models Based on the 'LIBLINEAR' C/C++ Library

Linear Classification with Online Adaptation of Coordinate Frequencies

Linearized Bregman Algorithms for Generalized Linear Models

Read, Create and Write 'PharmML' Standard Output (so) XML Files

Light Cone Reconstruction of States - Predictive State Estimation From Spatio-Temporal Data

Sensitivity Analysis for Case Weight in Normal Linear Regression

Airborne LiDAR Data Manipulation and Visualization for Forestry Applications

Selected data from the HiC paper of E. Lieberman-Aiden et al. in Science (2009)

Financial and Actuarial Mathematics for Life Contingencies

Quantification of Lifecourse Fluidity

Life History Models of Individuals

Two-Parameter HMD Model Life Table System

Compute the Top Decile Lift and Plot the Lift Curve

Wavelet Lifting Estimators of the Hurst Exponent for Regularly and Irregularly Sampled Time Series

Containerize R Markdown Documents

Tools for Communication with Lightning-Viz Server

Implementation of the 'Lights Out' Puzzle Game

Poisson Subordinated Distribution

Methods for Maximum Likelihood Estimation

Functions for Likelihood Asymptotics

Tools to Evaluate DNA Profile Evidence

Analysis and Visualization Likert Items

Linear Inverse Model examples and solution methods.

Jitter/CI Plot with Ordered Points Below the Limit of Detection

Linear Models for Microarray Data

GUI for limma package with two color microarrays

Solving Linear Inverse Models

Binning and Plotting of Linearly Referenced Data

Static Univariate Frequentist and Bayesian Linear Calibration

Functions to Explore L-Systems (Lindenmayer Systems)

The Lindley Distribution and Its Modifications

Manipulate Formulas and Evaluate Marginal Effects

Linearized Support Vector Regression

Minimum Distance Estimation in Linear Regression Model

Linear Excess Relative Risk Model

Lining Up Two Sets of Measurements

Linguistic Typology and Mapping

Linking GIS, Remote Sensing and Other Command Line Tools

Plot Linkage Group Maps with Quantitative Trait Loci

Tools for Generating, Visualizing, and Analysing Link Communities in Networks

Column-Linked and Row-Linked Matrices

Linkage information based genotype imputation method

3D Lever and Linkage Mechanism Modeling

linear Likelihood-based Imprecise Regression

Linear model and normality based transformation method (Linnorm)

Linear Programming / Optimization

Interactive Interpretation of Linear Regression Models

Selection of Linear Estimators

Tools to check R code style

Manipulation of Linear Systems of (in)Equalities

Static R Code Analysis

Implements Queue, PriorityQueue and Stack Classes

LiquidAssociation

A Fast and Versatile SVM Package

LInear Regression in Astronomy

Fitting lasso penalised additive isotone models

List-processing à la SRFI-1

Import output from LISREL into R

Statistical Methods for the Item Count Technique and List Experiment

List-Based Rules for Dynamic Treatment Regimes

Environments Behaving (Almost) as Lists

Tests of independence based on the Longest Increasing Subsequence

Convert Lists to Tidy Data Frames

'htmlwidget' for Interactive Views of R Lists

List with Defaults

Lightweight Portable Message Queue Using 'SQLite'

R at the Command-Line via 'r'

Liu Regression with Liu Biasing Parameters and Statistics

R Wrapper for LiveChat REST API

Logistic Joinpoint Regression

Leveraging Learning to Automatically Manage Algorithms

Locally linear embedding

Local Log-linear Models for Capture-Recapture

Data Analysis of Liquid-Liquid Systems

Add Standardized Regression Coefficients to lm-Objects

Linear Model with Breakpoint

Linear Model Bias Correction for RNA-Seq Data

Linear Model decomposition for Designed Multivariate Experiments

Linear Mixed-Effects Models using 'Eigen' and S4

Linear Mixed-Effects Models with Censored Responses

Linear Mixed Effects Models for Genome-Wide Association Studies

Linear Mixed Effects Models for QTL Mapping for Multienvironment and Multitrait Analysis

Compute the Personalized Activity Index Based on a Negative Binomial Model

Compute the Personalized Activity Index Based on a Flexible Bayesian Negative Binomial Model

Linear Mixed Effects Models with Non-Stationary Stochastic Processes

Model Selection and Post-hoc Analysis for (G)LMER Models

Tests in Linear Mixed Effects Models

Add smoothing spline modelling capability to nlme.

Latent Markov Models with and without Covariates

Testing for a subset of variance components in linear mixed models

Functions for estimation and inference of selection in age-structured populations

Functions for Forest Biometrics

LMGene Software for Data Transformation and Identification of Differentially Expressed Genes in Gene Expression Arrays

Linear Mixed Models

Goodness-of-fit-measures for linear mixed models with one-level-grouping

Linear mixed-effects models with Lasso

Multiple Ordinal Tobit (MOT) Model

Linear Mixed Effect Model Splines for Modelling and Analysis of Time Course Data

Model II Regression

L-moments

L-Moments, Censored L-Moments, Trimmed L-Moments, L-Comoments, and Many Distributions

L-Moments and Quantile Mixtures

Regional frequency analysis using L-moments

Permutation Tests for Linear Models

Linear Ridge Regression with Ridge Penalty and Ridge Statistics

Support for Linear Models

Testing Linear Regression Models

Linear Regression with Non-Constant Variances

Long Non-Coding RNA Identification Based on Features of Sequence, EIIP and Secondary Structure

Predicting Modulator and Functional/Survival Analysis

Identifying the Pathways Regulated by LncRNA Sets of Interest

Prioritizing Candidate LncRNAs Based on a Composite Multi-Level Network

LogNormal Response Time Item Response Theory Models

Lattice Options and Add-Ins

Local Depth

Estimating Local Gaussian Parameters

R API to LocalSolver

Computes Local False Discovery Rates

Functions for Performing Local FDR Estimation when Null and Alternative are Poisson

Test of Stationarity and Localized Autocovariance

Datasets for "Statistics: UnLocking the Power of Data"

Datasets for 'Statistics: Unlocking the Power of Data'

Kernel local polynomial regression

Genome-Wide Association Analysis of a Biomarker Accounting for Limit of Detection

Local Ordinal Embedding

A simple logging system for R, based on log4j.

Relative Risk Regression Using the Log-Binomial Model

Log-concave Density Estimation in Arbitrary Dimensions

Maximum likelihood estimation of a log-concave density based on censored data

Estimate a Log-Concave Probability Density from Iid Observations

Compute MLE of Log-Concave Density on R with Fixed Mode, and Perform Inference for the Mode.

Estimate a Log-Concave Probability Mass Function from Discrete i.i.d. Observations

CoxPH Model with Log Concave Baseline Distribution

R logging package

Logic Forest

Identification of SNP Interactions

LOGICOIL: multi-state prediction of coiled-coil oligomeric state.

Truth Table Logic Optimizer

Logic Regression

Firth's Bias-Reduced Logistic Regression

Diagnostic Tests for Models with a Binomial Response

Binary Dimensionality Reduction

Exact logistic regression including Firth correction

Functions, Data and Code for Binary and Binomial Data

Fitting l2-regularized logit choice models via generalized gradient descent

Infer network based on binary arrays using regularized logistic regression

Functions for the Logitnormal Distribution

logit-t Package

Double log normal distribution functions

Log-Multiplicative Models, Including Association Models

Logrank Test for Aggregated Survival Data

Inference in Logistic Regression

Logspline Density Estimation Routines

Kernel Regression Smoothing with Local or Global Plug-in Bandwidth

Lots Of Lasso

Location overlap analysis for enrichment of genomic ranges

Lomb-Scargle Periodogram

Package for Plotting Categorical Longitudinal and Time-Series Data

Model-Based Clustering and Classification for Longitudinal Data

Analysis of Multiple Time Course Data

Longitudinal Data

Statistics for Long-Memory Processes (Jan Beran) -- Data and Functions

Sample Size Calculations for Longitudinal Data

Recursive partitioning of longitudinal data using mixed-effects models

Expand Short URLs

Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian Models

Look-Up Tables using S4

loop decomposition of weighted directed graphs for life cycle analysis, providing flexbile network plotting methods, and analyzing food chain properties in ecology

A Collection of Tools to Conduct Levins' Loop Analysis

Uses an Archive to Amend Previous Stages of a Pipe using Current Output

Logistic Ordinal Regression Differential Item Functioning using IRT

LOw Rand and sparsE Covariance matrix estimation

Robust Loss Development Using MCMC

Missing Morphometric Data Simulation and Estimation

Runs Lotka's Law which is One of the Special Applications of Zipf's Law

LowMACA - Low frequency Mutation Analysis via Consensus Alignment

LowMACAAnnotation

Low Memory Use Trimmed K-Means

Low Rank Quadratic Programming

LP-BRIM Bipartite Modularity

Lassoed principal components for testing significance of features

Local Principal Curve Methods

Local Polynomial Density Estimation and Inference

Methods for analyzing microarray data using Local Pooled Error (LPE) method

A correction of the local pooled error (LPE) method to replace the asymptotic variance adjustment with an unbiased adjustment based on sample size.

Local polynomial estimators of intensity function or its derivatives

'dplyr' Verbs for Lists and Other Verbs for Data Frames

Linear Parametric Models Applied to Hydrological Series

Local Polynomial Estimators in Measurement Error Models

Merging linkage maps by linear programming

Modeler for linear programs (LP) and mixed integer linear programs (MILP)

Linear Programming Model for Network Inference

Lasso and Partial Ridge

Local Polynomial (Ridge) Regression

Linear Predictor Score, for Binary Inference from Multiple Continuous Variables

Interface to 'Lp_solve' v. 5.5 to Solve Linear/Integer Programs

R Interface to 'lp_solve' Version 5.5.2.0

Learned Pattern Similarity and Representation for Time Series

Symphony integer linear programming solver in R

Penalized Likelihood Inference for GLMs

Linear Quantile Mixed Models

Robust Linear Quantile Regression

Dose Response Signal Detection under Model Uncertainty

Sources an R "Module" with Caching & Encapsulation, Returning Exported Vars

Linear Regression by Gibbs Sampling

Different Types of Estimators to Deal with Multicollinearity

A Likelihood Ratio Test Accounting for Genetic Heterogeneity

Locally stationary two-dimensional wavelet process estimation scheme

A Multiscale Test of Spatial Stationarity for LS2W processes

Latent Semantic Analysis

Applied Latent Semantic Analysis (LSA) Functions

Datensätze und Übungsmaterial zu 'Large-Scale Assessment mit R'

Simulate Large Scale Assessment Data

Least-Squares Bilinear Clustering for Three-Way Data

Local Statistical Complexity - Automatic Pattern Discovery in Spatio-Temporal Data

Lots of Superior Depictions

Reading LSD Results (.res) Files

Least square dummy variable regression

Solving Least Squares Problems under Equality/Inequality Constraints

Linear Multiple Output Sparse Group Lasso

The Length of the Shorth

Latent Structure Learning

Least-Squares Means

American options pricing with Least Squares Monte Carlo method

Lysate and Secretome Peptide Feature Plotter

Linear Splines with Convenient Parametrisations

LS-PLS Models

Companion to "Learning Statistics with R"

the accelerated failure time model to right censored data based on least-squares principle

Locally Stationary Time Series

Simulation-Based Bayesian Inference for Latent Traits of Item Response Models

Latent Trait Models under IRT

Longitudinal Targeted Maximum Likelihood Estimation

LTPD and AOQL Plans for Acceptance Sampling Inspection by Variables

Perform LTR analysis on microarray data

Survival Trees to Fit Left-Truncated and Right-Censored and Interval-Censored Survival Data

Linear Time Series Analysis

Ridge and Liu Estimates based on LTS (Least Trimmed Squares) Method

Local Time Space Kriging

Lightweight Sparklines for a LaTeX Document

Make Dealing with Dates a Little Easier

Likelihood inference from case-control data Under Covariate Assumptions (LUCA)

Printing Floating Point Numbers in a Human-Friendly Format

Currency Formatting and Conversion

Linkage Using Diagnosis Codes

Land Use Change Modelling in R

Lumen Database API Client

BeadArray Specific Methods for Illumina Methylation and Expression Microarrays

Barnes Benchmark Illumina Tissues Titration Data

Illumina Human Illumina expression annotation data (chip lumiHumanAll)

Illumina Identifier mapping for Human

Illumina Mouse Illumina expression annotation data (chip lumiMouseAll)

Comprehensive Luminescence Dating Data Analysis

Illumina Rat Illumina expression annotation data (chip lumiRatAll)

TL/OSL Reader Simulator

Lunar Phase & Distance, Seasons and Other Environmental Factors

Reads from Two Lung Cancer Cell Lines

ExpressionSets for Parmigiani et al., 2004 Clinical Cancer Research paper

Lightweight Logging for R Scripts

Latent Variable Models for Networks

A Latent Variable Model for Mixed Continuous and Ordinal Responses

Latent Variable Network Modeling

Letter Value 'Boxplots'

Learning Vector Quantization Tools

LVS normalization for Agilent miRNA data

An Automated Approach to Evaluating Dose-Effect Experiments Following Litchfield and Wilcoxon (1949)

Fast LXB File Reader

Accurate Estimation of Clonal Coincidences and Abundances from Biological Replicates

Analyze high-throughput sequencing of T and B cell receptors