Renjin.org | Packages

R-based analysis of ChIP-seq And Differential Expression - a tool for integrating a count-based ChIP-seq analysis with differential expression summary data

RCAL

Regularized Calibrated Estimation

RCALI

Calculation of the Integrated Flow of Particles Between Polygons

Rcan

Cancer Registry Data Analysis and Visualisation

rcane

Different Numeric Optimizations to Estimate Parameter Coefficients

rcanvec

Access and Plot CanVec and CanVec+ Data for Rapid Basemap Creation in Canada

Rcapture

Loglinear Models for Capture-Recapture Experiments

RCarb

Dose Rate Modelling of Carbonate-Rich Samples

rcarbon

Calibration and Analysis of Radiocarbon Dates

rCarto

This package builds maps with a full cartographic layout.

rcartocolor

'CARTOColors' Palettes

RCAS

RNA Centric Annotation System

RCASPAR

A package for survival time prediction based on a piecewise baseline hazard Cox regression model.

RCassandra

R/Cassandra interface

rCAT

Conservation Assessment Tools

rCBA

CBA Classifier

rcbalance

Large, Sparse Optimal Matching with Refined Covariate Balance

rcbsubset

Optimal Subset Matching with Refined Covariate Balance

rcc

Parametric Bootstrapping to Control Rank Conditional Coverage

rccdates

Date Functions for Swedish Cancer Data

rccmisc

Miscellaneous R Functions for Swedish Regional Cancer Centers

rcdd

Computational Geometry

rcdk

Interface to the 'CDK' Libraries

rcdklibs

The CDK Libraries Packaged for R

RCEIM

R Cross Entropy Inspired Method for Optimization

Rcell

Microscopy Based Cytometry Data Analysis Package

RcellData

Example Dataset for 'Rcell' Package

rcellminer

rcellminer: Molecular Profiles and Drug Response for the NCI-60 Cell Lines

rcellminerData

rcellminerData: Molecular Profiles and Drug Response for the NCI-60 Cell Lines

Rcereal

C++11 Header Files for 'cereal'

RcextTools

Analytical Procedures in Support of Brazilian Public Sector External Auditing

rCGH

Comprehensive Pipeline for Analyzing and Visualizing Array-Based CGH Data

Rcgmin

Conjugate Gradient Minimization of Nonlinear Functions

rchallenge

A Simple Data Science Challenge System

Rchemcpp

Similarity measures for chemical compounds

Rchemcpp

An R package for computing the similarity of molecules

rcheology

Data on Base Packages for Current and Previous Versions of R

rchess

Chess Move, Generation/Validation, Piece Placement/ Movement, and Check/Checkmate/Stalemate Detection

rchie

A Parser for 'ArchieML'

RchivalTag

Analyzing Archival Tagging Data

Rchoice

Discrete Choice (Binary, Poisson and Ordered) Models with Random Parameters

rChoiceDialogs

rChoiceDialogs collection

RChronoModel

Post-Processing of the Markov Chain Simulated by ChronoModel or Oxcal

RchyOptimyx

Optimyzed Cellular Hierarchies for Flow Cytometry

rcicr

Reverse-Correlation Image-Classification Toolbox

RCircos

Circos 2D Track Plot

RcisTarget

RcisTarget: Identify transcription factor binding motifs enriched on a gene list

RcisTarget.hg19.motifDBs.cisbpOnly.500bp

RcisTarget motif databases for human (hg19) - Subset of 4.6k motifs

rcites

R Interface to the Species+ Database

rcitoid

Client for 'Citoid'

Rclean

A Tool for Writing Cleaner, more Transparent Code

RClickhouse

A 'DBI' Interface to the 'Yandex Clickhouse' Database Providing Basic 'dplyr' Support

rclimateca

Fetch Climate Data from Environment Canada

RClimMAWGEN

RClimMAWGEN (R Climate Index Multi-site Auto-regressive Weather GENeretor): a package to generate time series of climate indices from RMAWGEN generations.

rClinicalCodes

R tools for integrating with the www.clinicalcodes.org repository

rclinicaltrials

Download Aggregate Trial Information and Results from ClinicalTrials.gov

rclipboard

Shiny/R Wrapper for 'clipboard.js'

RClone

Partially Clonal Populations Analysis

Rclusterpp

Linkable C++ clustering

rCMA

R-to-Java Interface for 'CMA-ES'

rcmdcheck

Run 'R CMD check' from 'R' and Capture Results

Rcmdr

R Commander

RcmdrMisc

R Commander Miscellaneous Functions

RcmdrPlugin.aRnova

R Commander Plug-in for Repeated-Measures ANOVA

RcmdrPlugin.BCA

Rcmdr Plug-In for Business and Customer Analytics

RcmdrPlugin.BiclustGUI

'Rcmdr' Plug-in GUI for Biclustering

RcmdrPlugin.coin

Rcmdr Coin Plug-In

RcmdrPlugin.depthTools

R commander Depth Tools Plug-In

RcmdrPlugin.doBy

Rcmdr doBy Plug-In

RcmdrPlugin.DoE

R Commander Plugin for (industrial) Design of Experiments

RcmdrPlugin.doex

Rcmdr plugin for Stat 4309 course

RcmdrPlugin.EACSPIR

Plugin de R-Commander para el Manual 'EACSPIR'

RcmdrPlugin.EBM

Rcmdr Evidence Based Medicine Plug-in Package

RcmdrPlugin.EcoVirtual

Rcmdr EcoVirtual Plugin

RcmdrPlugin.epack

Rcmdr plugin for time series

RcmdrPlugin.Export

Export R Output to LaTeX or HTML

RcmdrPlugin.EZR

R Commander Plug-in for the EZR (Easy R) Package

RcmdrPlugin.FactoMineR

Graphical User Interface for FactoMineR

RcmdrPlugin.FuzzyClust

R Commander Plug-in for Fuzzy Clustering Methods (Fuzzy C-Means and Gustafson Kessel)

RcmdrPlugin.GWRM

R Commander Plug-in for Fitting Generalized Waring Regression Models

RcmdrPlugin.HH

Rcmdr Support for the HH Package

RcmdrPlugin.IPSUR

An IPSUR Plugin for the R Commander

RcmdrPlugin.KMggplot2

R Commander Plug-in for Data Visualization with 'ggplot2'

RcmdrPlugin.lfstat

'Rcmdr' Plug-in for Low Flow Analysis

RcmdrPlugin.MA

Graphical User Interface for Conducting Meta-Analyses in R

RcmdrPlugin.mosaic

Adds menu items to produce mosaic plots and assoc plots to Rcmdr

RcmdrPlugin.MPAStats

R Commander Plug-in for MPA Statistics

RcmdrPlugin.NMBU

R Commander Plug-in for University Level Applied Statistics

RcmdrPlugin.OptimClassifier

Create the Best Train for Classification Models

RcmdrPlugin.orloca

A GUI for Planar Location Problems

RcmdrPlugin.PcaRobust

R Commander Plug-in for Robust Principal Component Analysis

RcmdrPlugin.plotByGroup

Rcmdr plots by group using lattice

RcmdrPlugin.pointG

Graphical POINT of view for questionnaire data Rcmdr Plug-In

RcmdrPlugin.qcc

Rcmdr qcc Plug-In

RcmdrPlugin.qual

Rcmdr plugin for quality control course

RcmdrPlugin.RiskDemo

R Commander Plug-in for Risk Demonstration

RcmdrPlugin.RMTCJags

R MTC Jags 'Rcmdr' Plugin

RcmdrPlugin.ROC

Rcmdr Receiver Operator Characteristic Plug-In PACKAGE

RcmdrPlugin.sampling

Tools for sampling in Official Statistical Surveys

RcmdrPlugin.SCDA

Rcmdr Plugin for Designing and Analyzing Single-Case Experiments

RcmdrPlugin.seeg

Rcmdr Plugin for seeg

RcmdrPlugin.SLC

SLC Rcmdr Plug-in

RcmdrPlugin.SM

Rcmdr Sport Management Plug-In

RcmdrPlugin.sos

Efficiently search the R help pages

RcmdrPlugin.StatisticalURV

Statistical URV Rcmdr Plug-In

RcmdrPlugin.steepness

Steepness Rcmdr Plug-in

RcmdrPlugin.survival

R Commander Plug-in for the 'survival' Package

RcmdrPlugin.sutteForecastR

'Rcmdr' Plugin for Alpha-Sutte Indicator 'sutteForecastR'

RcmdrPlugin.TeachingDemos

Rcmdr Teaching Demos Plug-in

RcmdrPlugin.TeachStat

RCommander Plugin for Teaching Statistical Methods

RcmdrPlugin.temis

Graphical Integrated Text Mining Solution

RcmdrPlugin.UCA

UCA Rcmdr Plug-in

RCMIP5

Tools for Manipulating and Summarizing CMIP5 Data

Rcoclust

Co-Clustering with Document-Term Matrix

RColetum

Access your Coletum's Data from API

Rcolombos

Interface to Colombos Compendia using the Exposed REST API

RColorBrewer

ColorBrewer Palettes

rcompanion

Functions to Support Extension Education Program Evaluation

rcongresso

Wraps the API for the Brazilian Chamber of Deputies

rconifers

R interface to the CONIFERS forest growth model

rcoreoa

Client for the CORE API

rcorpora

A Collection of Small Text Corpora of Interesting Data

rcosmo

Cosmic Microwave Background Data Analysis

Rcpi

Molecular Informatics Toolkit for Compound-Protein Interaction in Drug Discovery

Rcplex

R Interface to CPLEX

RCPmod

Regions of Common Profiles Modelling with Mixtures-of-Experts

Rcpp

Seamless R and C++ Integration

Rcpp11

R and C++11

RcppAlgos

High Performance Tools for Combinatorics and Computational Mathematics

RcppAnnoy

'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest Neighbors

RcppAPT

'Rcpp' Interface to the APT Package Manager

RcppArmadillo

'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library

RcppBDT

Rcpp bindings for the Boost Date_Time library

RcppBlaze

'Rcpp' Integration for the 'Blaze' High-Performance C++ Math Library

rcppbugs

R binding for cppbugs

RcppCCTZ

'Rcpp' Bindings for the 'CCTZ' Library

RcppClassic

Deprecated 'classic' 'Rcpp' 'API'

RcppClassicExamples

Examples using 'RcppClassic' to Interface R and C++

RcppCNPy

Read-Write Support for 'NumPy' Files via 'Rcpp'

RcppCWB

'Rcpp' Bindings for the 'Corpus Workbench' ('CWB')

RcppDE

Global Optimization by Differential Evolution in C++

RcppDist

'Rcpp' Integration of Additional Probability Distributions

RcppDynProg

'Rcpp' Dynamic Programming

RcppEigen

'Rcpp' Integration for the 'Eigen' Templated Linear Algebra Library

RcppEigenAD

Compiles 'C++' Code using 'Rcpp', 'Eigen' and 'CppAD' to Produce First and Second Order Partial Derivatives

RcppEnsmallen

Header-Only C++ Mathematical Optimization Library for 'Armadillo'

RcppExamples

Examples using 'Rcpp' to Interface R and C++

RcppFaddeeva

'Rcpp' Bindings for the 'Faddeeva' Package

RcppGetconf

'Rcpp' Interface for Querying System Configuration Variables

RcppGreedySetCover

Greedy Set Cover

RcppGSL

'Rcpp' Integration for 'GNU GSL' Vectors and Matrices

RcppHMM

Rcpp Hidden Markov Model

RcppHNSW

'Rcpp' Bindings for 'hnswlib', a Library for Approximate Nearest Neighbors

RcppHoney

Iterator Based Expression Template Expansion of Standard Operators

RcppMeCab

'rcpp' Wrapper for 'mecab' Library

RcppMLPACK

'Rcpp' Integration for the 'MLPACK' Library

RcppMovStat

Fast Moving Statistics Calculation

RcppMsgPack

'MsgPack' C++ Header Files and Interface Functions for R

RcppNLoptExample

'Rcpp' Package Illustrating Header-Only Access to 'NLopt'

RcppNumerical

'Rcpp' Integration for Numerical Computing Libraries

RcppOctave

Seamless Interface to Octave -- And Matlab

RcppParallel

Parallel Programming Tools for 'Rcpp'

RcppProgress

An Interruptible Progress Bar with OpenMP Support for C++ in R Packages

RcppQuantuccia

R Bindings to the 'Quantuccia' Header-Only Essentials of 'QuantLib'

RcppRedis

'Rcpp' Bindings for 'Redis' using the 'hiredis' Library

RcppRoll

Efficient Rolling / Windowed Operations

RcppShark

R Interface to the Shark Machine Learning Library

RcppSMC

Rcpp Bindings for Sequential Monte Carlo

RcppStreams

'Rcpp' Integration of the 'Streamulus' 'DSEL' for Stream Processing

RcppThread

R-Friendly Threading in C++

RcppTN

Rcpp-Based Truncated Normal Distribution RNG and Family

RcppTOML

'Rcpp' Bindings to Parser for Tom's Obvious Markup Language

RcppXPtrUtils

XPtr Add-Ons for 'Rcpp'

RcppXsimd

Xsimd C++ Header-Only Library Files

RcppXts

Interface the xts API via Rcpp

RcppZiggurat

'Rcpp' Integration of Different "Ziggurat" Normal RNG Implementations

rcqp

Interface to the Corpus Query Protocol

Rcrawler

Web Crawler and Scraper

rcreds

Securely Use Credentials Within R Scripts

RCriteo

Loading Criteo Data into R

Rcriticor

Pierre-Goldwin Correlogram

rCRM

Regularized Continual Reassessment Method

RCRnorm

An Integrated Regression Model for Normalizing 'NanoString nCounter' Data

rcrossref

Client for Various 'CrossRef' 'APIs'

rcrtan

Criterion-Referenced Test Analysis

rcrypt

Symmetric File Encryption Using GPG

RCrypto

'Httr' Implementation of the 'Coinmarketcap' API

RCryptsy

Access to Cryptsy Crypto-Currency Exchange Public Information API via R

Rcsdp

R Interface to the CSDP Semidefinite Programming Library

RCSF

Airborne LiDAR Filtering Method Based on Cloth Simulation

rcss

Convex Switching Systems

Rcssplot

Styling of Graphics using Cascading Style Sheets

rcube

Simulations and Visualizations of Rubik's Cube (with Mods)

rCUR

CUR decomposition package

rcure

Robust Cure Models for Survival Analysis

RCurl

General Network (HTTP/FTP/...) Client Interface for R

rcv

Ranked Choice Voting

RCy3

Functions to Access and Control Cytoscape

RCyjs

Display and manipulate graphs in cytoscape.js

RCytoscape

Display and manipulate graphs in Cytoscape

RCzechia

Spatial Objects of the Czech Republic

Rd

Rd Manipulation and Creation

Rd2md

Markdown Reference Manuals

Rd2roxygen

Convert Rd to 'Roxygen' Documentation

rda

Shrunken Centroids Regularized Discriminant Analysis

rdatacite

'DataCite' Client for 'OAI-PMH' Methods and their Search API

rdatamarket

Data access API for DataMarket.com

rdataretriever

R Interface to the Data Retriever

RDAVIDWebService

An R Package for retrieving data from DAVID into R objects using Web Services API.

rdbnomics

Download DBnomics Data

rdd

Regression Discontinuity Estimation

rddapp

Regression Discontinuity Design Application

rddensity

Manipulation Testing Based on Density Discontinuity

rddtools

Toolbox for Regression Discontinuity Design ('RDD')

rde

Reproducible Data Embedding

rDEA

Robust Data Envelopment Analysis (DEA) for R

rdefra

Interact with the UK AIR Pollution Database from DEFRA

rdetools

Relevant Dimension Estimation (RDE) in Feature Spaces

RDF

RDF reading and writing

rdflib

Tools to Manipulate and Query Semantic Data

rdfp

An Implementation of the 'DoubleClick for Publishers' API

RDFTensor

Different Tensor Factorization (Decomposition) Techniques for RDF Tensors (Three-Mode-Tensors)

rDGIdb

R Wrapper for DGIdb

rdhs

API Client and Dataset Management for the Demographic and Health Survey (DHS) Data

rdi

Repertoire Dissimilarity Index

rdian

Client Library for The Guardian

Rdice

A Collection of Functions to Experiment Dice Rolls

RDIDQ

It perform Quality check on data

RDieHarder

R Interface to the 'DieHarder' RNG Test Suite

Rdimtools

Dimension Reduction and Estimation Methods

Rdisop

Decomposition of Isotopic Patterns

rdist

Calculate Pairwise Distances

Rdistance

Distance-Sampling Analyses for Density and Abundance Estimation

rdiversity

Measurement and Partitioning of Similarity-Sensitive Biodiversity

rdlocrand

Local Randomization Methods for RD Designs

RDML

Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files

rdmulti

Analysis of RD Designs with Multiple Cutoffs or Scores

rDNA

R Bindings for the Discourse Network Analyzer

rdnb

R Interface to the 'Deutsche Nationalbibliothek (German National Library) API'

rdoc

Colourised R Documentation

RDocumentation

Integrate R with 'RDocumentation'

rdomains

Get the Category of Content Hosted by a Domain

RDota2

An R Steam API Client for Valve's Dota2

rDotNet

Low-Level Interface to the '.NET' Virtual Machine Along the Lines of the R C/Call API

rdoxygen

Create Doxygen Documentation for Source Code

Rdpack

Update and Manipulate Rd Documentation Objects

rdpla

Client for the Digital Public Library of America ('DPLA')

rdpower

Power Calculations for RD Designs

rdrobust

Robust Data-Driven Statistical Inference in Regression-Discontinuity Designs

Rdrools

A Rules Engine Based on 'Drools'

Rdroolsjars

Rdrools JARs

rdrop2

Programmatic Interface to the 'Dropbox' API

RDRToolbox

A package for nonlinear dimension reduction with Isomap and LLE.

rdryad

Access for Dryad Web Services

RDS

Respondent-Driven Sampling

Rdsdp

R Interface to DSDP Semidefinite Programming Library

Rdsm

Threads Environment for R

RDSTK

An R wrapper for the Data Science Toolkit API

RDStreeboot

RDS Tree Bootstrap Method

rdtLite

Provenance Collector

Rdtq

Density Tracking by Quadrature

Rduino

A Microcontroller Interface

rDVR

The rDVR package allows you to start stop and save a video server from within R.

rdwd

Select and Download Climate Data from 'DWD' (German Weather Service)

rdyncall

Improved Foreign Function Interface (FFI) and Dynamic Bindings to C Libraries (e.g. OpenGL)

re2r

RE2 Regular Expression

reactlog

Reactivity Visualizer for 'shiny'

reactome.db

A set of annotation maps for reactome

ReactomePA

Reactome Pathway Analysis

reactR

React Helpers

ReacTran

Reactive Transport Modelling in 1d, 2d and 3d

read.dbc

Read Data Stored in DBC (Compressed DBF) Files

read.gb

Open GenBank Files

Read.isi

Automated access to old World Fertility Survey data saved in fixed-width format based on ISI-formatted codebooks.

readABF

Loads Axon Binary Files

readability

Calculate Readability Scores

readabs

Download and Tidy Time Series Data from the Australian Bureau of Statistics

readat

Functionality to Read and Manipulate SomaLogic ADAT files

readbitmap

Simple Unified Interface to Read Bitmap Images (BMP,JPEG,PNG,TIFF)

readBrukerFlexData

Reads Mass Spectrometry Data in Bruker *flex Format

readbulk

Read and Combine Multiple Data Files

reader

Suite of Functions to Flexibly Read Data from Files

readGenalex

Read, Write, Manipulate and Convert GenAlEx-Format Genotype Files

readHAC

Read Acoustic HAC Format

readit

Effortlessly Read Any Rectangular Data

readJDX

Import Data in the JCAMP-DX Format

readMETEO

Weather Data Download from WWW.METEOGALICIA.COM

readMLData

Reading Machine Learning Benchmark Data Sets in Different Formats

readmnist

Read MNIST Dataset

readMzXmlData

Reads Mass Spectrometry Data in mzXML Format

readobj

Fast Reader for 'Wavefront' OBJ 3D Scene Files

readODS

Read and Write ODS Files

readOffice

Read Text Out of Modern Office Files

ReadqPCR

Read qPCR data

readr

Read Rectangular Text Data

readroper

Simply Read ASCII Single and Multicard Polling Datasets

readsdmx

Read SDMX-XML Data

readstata13

Import 'Stata' Data Files

readtext

Import and Handling for Plain and Formatted Text Files

readxl

Read Excel Files

realestateDK

A Wrapper for the API of the Danish Housing Market Statistics

RealVAMS

Multivariate VAM Fitting

reams

Resampling-Based Adaptive Model Selection

Rearrangement

Monotonize Point and Interval Functional Estimates by Rearrangement

REAT

Regional Economic Analysis Toolbox

reb

Regional Expression Biases

REBayes

Empirical Bayes Estimation and Inference

rebird

R Client for the eBird Database of Bird Observations

rebmix

Finite Mixture Modeling, Clustering & Classification

rebus

Build Regular Expressions in a Human Readable Way

rebus.base

Core Functionality for the 'rebus' Package

rebus.datetimes

Date and Time Extensions for the 'rebus' Package

rebus.numbers

Numeric Extensions for the 'rebus' Package

rebus.unicode

Unicode Extensions for the 'rebus' Package

RECA

Relevant Component Analysis for Supervised Distance Metric Learning

recalls

Access U.S. Federal Government Recall Data

reccsim

Simulation of Rare Events Case-Control Studies.

recexcavAAR

3D Reconstruction of Archaeological Excavations

rechonest

R Interface to Echo Nest API

ReCiPa

Redundancy Control in Pathways databases

recipes

Preprocessing Tools to Create Design Matrices

reclin

Record Linkage Toolkit

recluster

Ordination Methods for the Analysis of Beta-Diversity Indices

recmap

Compute the Rectangular Statistical Cartogram

recoder

A Simple and Flexible Recoder

recombinator

Recombinate Nested Lists to Dataframes

recommenderlab

Lab for Developing and Testing Recommender Algorithms

recommenderlabBX

Book-Crossing Dataset (BX) for 'recommenderlab'

recommenderlabJester

Jester Dataset for 'recommenderlab'

Recon

Computational Tools for Economics

reconstructr

Session Reconstruction and Analysis

recorder

Toolkit to Validate New Data for a Predictive Model

RecordLinkage

Record Linkage in R

recordr

R Provenance Tracking

Records

Record Values and Record Times

recosystem

Recommender System using Matrix Factorization

recount

Explore and download data from the recount project

recoup

An R package for the creation of complex genomic profile plots

RECSO

Robust and Efficient Analysis using Control function approach, of a Secondary Outcome

recurse

Computes Revisitation Metrics for Trajectory Data

red

IUCN Redlisting Tools

reda

Recurrent Event Data Analysis

REdaS

Companion Package to the Book 'R: Einführung durch angewandte Statistik'

redcapAPI

Interface to 'REDCap'

REDCapR

Interaction Between R and REDCap

RedditExtractoR

Reddit Data Extraction Toolkit

reddPrec

Reconstruction of Daily Data - Precipitation

REddyProc

Post Processing of (Half-)Hourly Eddy-Covariance Measurements

REddyProcNCDF

Reading Data from NetCDF Files for 'REddyProc'

RedeR

Interactive visualization and manipulation of nested networks

redist

Markov Chain Monte Carlo Methods for Redistricting Simulation

redland

RDF Library Bindings in R

redlistr

Tools for the IUCN Red List of Ecosystems and Species

rEDM

Applications of Empirical Dynamic Modeling from Time Series

Redmonder

Microsoft(r)-Inspired Color Palettes

redR

REgularization by Denoising (RED)

REDseq

Analysis of high-throughput sequencing data processed by restriction enzyme digestion

redshiftTools

Amazon Redshift Tools

redux

R Bindings to 'hiredis'

REEMtree

Regression Trees with Random Effects for Longitudinal (Panel) Data

ref

References for R

ref.ICAR

Objective Bayes Intrinsic Conditional Autoregressive Model for Areal Data

referenceIntervals

Reference Intervals

RefFreeEWAS

EWAS using Reference-Free DNA Methylation Mixture Deconvolution

refGenome

Gene and Splice Site Annotation Using Annotation Data from 'Ensembl' and 'UCSC' Genome Browsers

refimpact

API Wrapper for the UK REF 2014 Impact Case Studies Database

refinr

Cluster and Merge Similar Values Within a Character Vector

RefManageR

Straightforward 'BibTeX' and 'BibLaTeX' Bibliography Management

RefNet

A queryable collection of molecular interactions, from many sources

refnr

Refining Data Table Using a Set of Formulas

RefPlus

A function set for the Extrapolation Strategy (RMA+) and Extrapolation Averaging (RMA++) methods.

refset

Subsets with Reference Semantics

refuge

Locate Trans and Intersex-Friendly Toilets

refund

Regression with Functional Data

refund.shiny

Interactive Plotting for Functional Data Analyses

refund.wave

Wavelet-Domain Regression with Functional Data

regclass

Tools for an Introductory Class in Regression and Modeling

RegClust

Cluster analysis via regression coefficients.

reGenotyper

Detecting Mislabeled Samples in Genetic Data

REGENT

Risk Estimation for Genetic and Environmental Traits

regexPipes

Wrappers Around 'base::grep()' for Use with Pipes

regexr

Readable Regular Expressions

regexSelect

Regular Expressions in 'shiny' Select Lists

reghelper

Helper Functions for Regression Analysis

regioneR

Association analysis of genomic regions based on permutation tests

regionReport

Generate HTML or PDF reports for a set of genomic regions or DESeq2/edgeR results

registry

Infrastructure for R Package Registries

reglogit

Simulation-Based Regularized Logistic Regression

regnet

Network-Based Regularization for Generalized Linear Models

regplot

Enhanced Regression Nomogram Plot

regpro

Nonparametric Regression

regress

Gaussian Linear Models with Linear Covariance Structure

RegressionFactory

Expander Functions for Generating Full Gradient and Hessian from Single-Slot and Multi-Slot Base Distributions

regressoR

Regression Data Analysis System

regrrr

Toolkit for Compiling, (Post-Hoc) Testing, and Plotting Regression Results

regRSM

Random Subspace Method (RSM) for Linear Regression

RegSDC

Information Preserving Regression-Based Tools for Statistical Disclosure Control

regsel

Variable Selection and Regression

regsem

Regularized Structural Equation Modeling

regspec

Non-Parametric Bayesian Spectrum Estimation for Multirate Data

regsplice

L1-regularization based methods for detection of differential splicing

regsubseq

Detect and Test Regular Sequences and Subsequences

regtest

Regression testing

regtools

Regression Tools

RegularizedSCA

Regularized Simultaneous Component Based Data Integration

rehh

Searching for Footprints of Selection using "Extended Haplotype Homozygosity" Based Tests

rehh.data

Data Only: Searching for Footprints of Selection using Haplotype Homozygosity Based Tests

rEHR

Manipulating and Analysing Electronic Health Record Data

rehydratoR

Downloads Tweets from a List of Tweet IDs

REIDS

Random Effects for the Identification of Differential Splicing

reinforcedPred

Reinforced Risk Prediction with Budget Constraint

reinforcelearn

Reinforcement Learning

ReinforcementLearning

Model-Free Reinforcement Learning

ReIns

Functions from "Reinsurance: Actuarial and Statistical Aspects"

reinstallr

Search and Install Missing Packages

reinsureR

Reinsurance Treaties Application

rel

Reliability Coefficients

rela

Item Analysis Package with Standard Errors

relabeLoadings

Relabel Loadings from MCMC Output for Confirmatory Factor Analysis

relaimpo

Relative Importance of Regressors in Linear Models

relatable

Functions for Mapping Key-Value Pairs, Many-to-Many, One-to-Many, and Many-to-One Relations

Relatedness

Maximum Likelihood Estimation of Relatedness using EM Algorithm

relations

Data Structures and Algorithms for Relations

RelativeRisk

Relative Risk

relax

relax -- R Editor for Literate Analysis and lateX

relaxnet

Relaxation of glmnet models (as in relaxed lasso, Meinshausen 2007)

relaxo

Relaxed Lasso

reldist

Relative Distribution Methods

relen

Compute Relative Entropy

relevent

Relational Event Models

Relexon

Explore the UK's National Power Grid Datasets

Reliability

Functions for estimating parameters in software reliability models

ReliabilityTheory

Tools for Structural Reliability Analysis

reliaR

Package for some probability distributions.

relimp

Relative Contribution of Effects in a Regression Model

RelimpPCR

Relative Importance PCA Regression

relMix

Relationship Inference for DNA Mixtures

relSim

Relative Simulator

relsurv

Relative Survival

RelValAnalysis

Relative Value Analysis

rem

Relational Event Models (REM)

rematch

Match Regular Expressions with a Nicer 'API'

rematch2

Tidy Output from Regular Expression Matching

remedy

'RStudio' Addins to Simplify 'Markdown' Writing

remindR

Insert and Extract "Reminders" from Function Comments

remix

Remix your data

rEMM

Extensible Markov Model for Modelling Temporal Relationships Between Clusters

remMap

Regularized Multivariate Regression for Identifying Master Predictors

remote

Empirical Orthogonal Teleconnections in R

remoter

Remote R: Control a Remote R Session from a Local One

remotes

R Package Installation from Remote Repositories, Including 'GitHub'

REMP

Repetitive Element Methylation Prediction

rENA

Epistemic Network Analysis

REndo

Fitting Linear Models with Endogenous Regressors using Latent Instrumental Variables

Renext

Renewal Method for Extreme Values Extrapolation

RenextGUI

GUI for Renext

renpow

Renewable Power Systems and the Environment

rentrez

'Entrez' in R

Renvlp

Computing Envelope Estimators

Reol

R interface to the Encyclopedia of Life

ReorderCluster

Reordering the dendrogram according to the class labels

Reot

Empirical Orthogonal Teleconnections in R

RepeatABEL

GWAS for Multiple Observations on Related Individuals

repeated

Non-Normal Repeated Measurements Models

RepeatedHighDim

Global tests for expression data of high-dimensional sets of molecular features.

repfdr

Replicability Analysis for Multiple Studies of High Dimension

repijson

Tools for Handling EpiJSON (Epidemiology Data) Files

Repitools

Epigenomic tools

REPLesentR

Presentations in the REPL

Replicate

Statistical Metrics for Multisite Replication Studies

replicateBE

Average Bioequivalence with Expanding Limits (ABEL)

replicatedpp2w

Two-Way ANOVA-Like Method to Analyze Replicated Point Patterns

Replication

Test Replications by Means of the Prior Predictive p-Value

replicationDemos

Agnotology

replicationInterval

Replication Interval Functions

Repliscope

Replication Timing Profiling using DNA Copy Number

replyr

Patches to Use 'dplyr' on Remote Data Sources

repmis

Miscellaneous Tools for Reproducible Research

repo

A Data-Centered Data Flow Manager

RepoGenerator

Generates a Project and Repo for Easy Initialization of a Workshop

repolr

Repeated Measures Proportional Odds Logistic Regression

ReporteRs

Microsoft Word and PowerPoint Documents Generation

ReporteRsjars

External Jars Required for Package 'ReporteRs'

ReportingTools

Tools for making reports in various formats

reportr

A General Message and Error Reporting System

reportReg

An Easy Way to Report Regression Analysis

reportROC

An Easy Way to Report ROC Analysis

reportRx

Tools for automatically generating reproducible clinical report

reports

Assist the Workflow of Writing Academic Articles and Other Reports

reporttools

Generate LaTeX Tables of Descriptive Statistics

REPPlab

R Interface to 'EPP-Lab', a Java Program for Exploratory Projection Pursuit

repr

Serializable Representations

repra

Renewable Energy Probability Resource Assessment Tool (REPRA)

represent

Determine the representativity of two multidimensional data sets

represtools

Reproducible Research Tools

reprex

Prepare Reproducible Example Code via the Clipboard

reproducer

Reproduce Statistical Analyses and Meta-Analyses

reproducible

A Set of Tools that Enhance Reproducibility Beyond Package Management

reproj

Coordinate System Transformations for Map Data

REPTILE

Regulatory DNA Element Prediction

repurrrsive

Examples of Recursive Lists and Nested or Split Data Frames

ReQON

Recalibrating Quality Of Nucleotides

reqres

Powerful Classes for HTTP Requests and Responses

REQS

R/EQS Interface

request

High Level 'HTTP' Client

requireR

R Source Code Modularizer

rerddap

General Purpose Client for 'ERDDAP' Servers

rerddapXtracto

Extracts Environmental Data from 'ERDDAP' Web Services

REREFACT

Reordering and/or Reflecting Factors for Simulation Studies with Exploratory Factor Analysis

reReg

Recurrent Event Regression

rerf

Randomer Forest

rERR

Excess Relative Risk Models

resample

Resampling Functions

resampledata

Data Sets for Mathematical Statistics with Resampling in R

resautonet

Autoencoder-based Residual Deep Network with Keras Support

ResearchMethods

Using GUIs to help teach statistics to non-statistics students

resemble

Regression and Similarity Evaluation for Memory-Based Learning in Spectral Chemometrics

reservoir

Tools for Analysis, Design, and Operation of Water Supply Storages

reshape

Flexibly Reshape Data

reshape2

Flexibly Reshape Data: A Reboot of the Reshape Package

reshapeGUI

A GUI for the reshape2 and plyr packages.

ResistorArray

Electrical Properties of Resistor Networks

ResourceSelection

Resource Selection (Probability) Functions for Use-Availability Data

respirometry

Tools for Conducting and Analyzing Respirometry Experiments

RESS

Integrates R and Essentia

REST

RcmdrPlugin Easy Script Templates

restatapi

Search and Retrieve Data from Eurostat Database

restez

Create and Query a Local Copy of 'GenBank' in R

restfulr

R Interface to RESTful Web Services

restfulSE

Access matrix-like HDF5 server content or BigQuery content through a SummarizedExperiment interface

restfulSEData

Example metadata for the "restfulSE" R package

restlos

Robust Estimation of Location and Scatter

restorepoint

Debugging with Restore Points

restrictedMVN

Multivariate Normal Restricted by Affine Constraints

restriktor

Restricted Statistical Estimation and Inference for Linear Models

resumer

Build Resumes with R

rethinker

RethinkDB Client

reticulate

Interface to 'Python'

retimes

Reaction Time Analysis

retistruct

Retinal Reconstruction Program

retrodesign

Tools for Type S (Sign) and Type M (Magnitude) Errors

retrosheet

Import Professional Baseball Data from 'Retrosheet'

reutils

Talk to the NCBI EUtils

reval

Repeated Function Evaluation for Sensitivity Analysis

revdbayes

Ratio-of-Uniforms Sampling for Bayesian Extreme Value Analysis

revealedPrefs

Revealed Preferences and Microeconomic Rationality

revealjs

R Markdown Format for 'reveal.js' Presentations

RevEcoR

Reverse Ecology Analysis on Microbiome

revengc

Reverse Engineering Summarized Data

reverseR

Linear Regression Stability to Significance Reversal

revgeo

Reverse Geocoding with the Photon Geocoder for OpenStreetMap, Google Maps, and Bing

review

Manage Review Logs

revtools

Tools to Support Evidence Synthesis

reweight

Adjustment of Survey Respondent Weights

rex

Friendly Regular Expressions

Rexperigen

R Interface to Experigen

rexpokit

R Wrappers for EXPOKIT; Other Matrix Functions

rexposome

Exposome exploration and outcome data analysis

Rfacebook

Access to Facebook API via R

rfacebookstat

Load Data from Facebook API Marketing

Rfast

A Collection of Efficient and Extremely Fast R Functions

Rfast2

A Collection of Efficient and Extremely Fast R Functions II

rfbCNPJ

Downloads and Parses Data from the Department of Federal Revenue in Brazil

RFc

Client for FetchClimate Web Service

rFDSN

Get Seismic Data from the International Federation of Digital Seismograph Networks

rFerns

Random Ferns Classifier

RFGLS

Rapid Feasible Generalized Least Squares

RFgroove

Importance Measure and Selection for Groups of Variables with Random Forests

rfigshare

An R Interface to 'figshare'

RFinanceYJ

RFinfer

Inference for Random Forests

rfishbase

R Interface to 'FishBase'

RFishBC

Back-Calculation of Fish Length

rfisheries

'Programmatic Interface to the 'openfisheries.org' API'

Rfit

Rank Estimation for Linear Models

rflann

Basic R Interface to the 'FLANN' C++ Library

rflexscan

The Flexible Spatial Scan Statistic

rflights

Query Plane Tickets using the 'Kiwi' API

RFLPtools

Tools to analyse RFLP data

rfm

Recency, Frequency and Monetary Value Analysis

RFmarkerDetector

Multivariate Analysis of Metabolomics Data using Random Forests

rfml

MarkLogic NoSQL Database Server in-Database Analytics for R

RfmriVC

Varying stimulus coefficient fMRI models in R

Rfmtool

Fuzzy Measure Tools

rfoaas

R Interface to 'FOAAS'

RFOC

Graphics for Spherical Distributions and Earthquake Focal Mechanisms

Rfolding

The Folding Test of Unimodality

RForcecom

Data Integration Feature for Force.com and Salesforce.com

rfordummies

Code Examples to Accompany the Book "R for Dummies"

rforensicbatwing

BATWING for Calculating Forensic Trace-Suspect Match Probabilities

rForest

Forest Inventory and Analysis

RFormatter

R Source Code Formatter

RforProteomics

Companion package to the 'Using R and Bioconductor for proteomics data analysis' publication

rfPermute

Estimate Permutation p-Values for Random Forest Importance Metrics

rfPred

Assign rfPred functional prediction scores to a missense variants list

RFreak

R/FrEAK interface

rFSA

Feasible Solution Algorithm for Finding Best Subsets and Interactions

Rfssa

Functional Singular Spectrum Analysis

rFTRLProximal

FTRL-Proximal Algorithm

rfUtilities

Random Forests Model Selection and Performance Evaluation

rfVarImpOOB

Unbiased Variable Importance for Random Forests

rfviz

Interactive Visualization Tool for Random Forests

RGA

A Google Analytics API Client

Rga4gh

An Interface to the GA4GH API

rgabriel

Gabriel Multiple Comparison Test and Plot the Confidence Interval on Barplot

rGADEM

de novo motif discovery

RGalaxy

Make an R function available in the Galaxy web platform

rgam

Robust Generalized Additive Model

rGammaGamma

Gamma convolutions for methylation array background correction.

rgauges

R wrapper to Gaug.es API

Rgb

The R Genome Browser

rgbif

Interface to the Global 'Biodiversity' Information Facility API

RGBM

LS-TreeBoost and LAD-TreeBoost for Gene Regulatory Network Reconstruction

Rgbp

Hierarchical Modeling and Frequency Method Checking on Overdispersed Gaussian, Poisson, and Binomial Data

RGCCA

Regularized and Sparse Generalized Canonical Correlation Analysis for Multiblock Data

rgcvpack

R Interface for GCVPACK Fortran Package

RGCxGC

Preprocessing and Multivariate Analysis of Bidimensional Gas Chromatography Data

rgdal

Bindings for the 'Geospatial' Data Abstraction Library

rgdax

Wrapper for 'Coinbase Pro (GDAX)' Cryptocurrency Exchange

RGeckoboard

R API for Geckoboard

rgen

Random Sampling Distribution C++ Routines for Armadillo

RGenData

Generates Multivariate Nonnormal Data and Determines How Many Factors to Retain

RGENERATE

Tools to Generate Vector Time Series

RGENERATEPREC

Tools to Generate Daily-Precipitation Time Series

RGenetics

R packages for genetics research

rgenoud

R Version of GENetic Optimization Using Derivatives

rgeoapi

Get Information from the GeoAPI

RGeode

Geometric Density Estimation

rgeolocate

IP Address Geolocation

rgeopat2

Additional Functions for 'geoPAT' 2

rgeos

Interface to Geometry Engine - Open Source ('GEOS')

rgeospatialquality

Wrapper for the Geospatial Data Quality REST API

rgexf

Build, Import and Export GEXF Graph Files

RGF

Regularized Greedy Forest

rggobi

Interface Between R and 'GGobi'

RghcnV3

Global Historical Climate Network Version 3

rgho

Access WHO Global Health Observatory Data from R

RGIFT

Create quizzes in GIFT Format

Rgin

gin in R

rgl

3D Visualization Using OpenGL

rglobi

R Interface to Global Biotic Interactions

Rglpk

R/GNU Linear Programming Kit Interface

rglwidget

'rgl' in 'htmlwidgets' Framework

RGMQL

GenoMetric Query Language for R/Bioconductor

RGMQLlib

RGMQLlib, java libraries to run GMQL scala API

Rgnuplot

R Interface for Gnuplot

rGoodData

GoodData API Client Package

RGoogleAnalytics

R Wrapper for the Google Analytics API

RGoogleAnalyticsPremium

Unsampled Data in R for Google Analytics Premium Accounts

RGoogleFit

R Interface to Google Fit API

RgoogleMaps

Overlays on Static Maps

rgp

R genetic programming framework

rgpui

UI for the RGP genetic programming framework

rgr

Applied Geochemistry EDA

RGraph2js

Convert a Graph into a D3js Script

RGraphics

Data and Functions from the Book R Graphics, Second Edition

RGraphM

Graph Matching Library for R

Rgraphviz

Provides plotting capabilities for R graph objects

rgrass7

Interface Between GRASS 7 Geographical Information System and R

rGREAT

Client for GREAT Analysis

RGreenplum

Interface to 'Greenplum' Database

Rgretl

Interface to 'gretlcli'

rGroovy

Groovy Language Integration

rgrs

Functions to make R usage in social sciences easier (in french)

RGSEA

Random Gene Set Enrichment Analysis

rgsepd

Gene Set Enrichment / Projection Displays

rgsp

Repetitive Group Sampling Plan Based on Cpk

RGtk2

R Bindings for Gtk 2.8.0 and Above

RGtk2Extras

Data frame editor and dialog making wrapper for RGtk2

rgu34a.db

Affymetrix Rat Genome U34 Set annotation data (chip rgu34a)

rgu34acdf

rgu34aprobe

Probe sequence data for microarrays of type rgu34a

rgu34b.db

Affymetrix Rat Genome U34 Set annotation data (chip rgu34b)

rgu34bcdf

rgu34bprobe

Probe sequence data for microarrays of type rgu34b

rgu34c.db

Affymetrix Rat Genome U34 Set annotation data (chip rgu34c)

rgu34ccdf

rgu34cprobe

Probe sequence data for microarrays of type rgu34c

rguatlas4k.db

Clontech BD Atlas Long Oligos Rat 4K annotation data (chip rguatlas4k)

rgug4105a.db

Agilent annotation data (chip rgug4105a)

rgug4130a.db

Agilent Rat annotation data (chip rgug4130a)

rgug4131a.db

Agilent "Rat Genome, Whole" annotation data (chip rgug4131a)

rgw

Goodman-Weare Affine-Invariant Sampling

RH2

DBI/RJDBC Interface to H2 Database

rHadoopClient

hadoop client interface for R

rhandsontable

Interface to the 'Handsontable.js' Library

RHawkes

Renewal Hawkes Process

rhdf5

HDF5 interface to R

rhdf5client

Access HDF5 content from h5serv

Rhdf5lib

hdf5 library as an R package

rHealthDataGov

Retrieve data sets from the HealthData.gov data API

rhesus.db0

Base Level Annotation databases for rhesus

rhesuscdf

rhesusprobe

Probe sequence data for microarrays of type rhesus

rheumaticConditionWOLLBOLD

Normalized gene expression dataset published by Wollbold et al. [2009] (WOLLBOLD).

Rhh

Calculating multilocus heterozygosity and heterozygosity-heterozygosity correlation

rhierbaps

Clustering Genetic Sequence Data Using the HierBAPS Algorithm

RHive

R and Hive

rhli

An R Implementation of the FIS MarketMap C-Toolkit

rhmc

Hamiltonian Monte Carlo

RHmm

Hidden Markov Models simulations and estimations

rhmmer

Utilities Parsing 'HMMER' Results

RHMS

Hydrologic Modelling System for R Users

rhnerm

Random Heteroscedastic Nested Error Regression

rhoR

Rho for Inter Rater Reliability

rhosp

Side Effect Risks in Hospital : Simulation and Estimation

Rhpc

Permits *apply() Style Dispatch for 'HPC'

RHPCBenchmark

Benchmarks for High-Performance Computing Environments

RhpcBLASctl

Control the Number of Threads on 'BLAS'

rHpcc

Interface between HPCC and R

RHRV

Heart Rate Variability Analysis of ECG Data

RHT

Regularized Hotelling's T-square Test for Pathway (Gene Set) Analysis

Rhtslib

HTSlib high-throughput sequencing library as an R package

rhub

Connect to 'R-hub'

rHVDM

Hidden Variable Dynamic Modeling

rhymer

Wrapper for the 'Datamuse' API to Find Rhyming and Associated Words

ri

ri: R package for performing randomization-based inference for experiments

ri16cod.db

Codelink Rat Inflammation 16 Bioarray annotation data (chip ri16cod)

ri2

Randomization Inference for Randomized Experiments

RI2by2

Randomization Inference for Treatment Effects on a Binary Outcome

RIA

Radiomics Image Analysis Toolbox for Medial Images

RiboProfiling

Ribosome Profiling Data Analysis: from BAM to Data Representation and Interpretation

riboSeqR

Analysis of sequencing data from ribosome profiling experiments

ricecdf

riceprobe

Probe sequence data for microarrays of type rice

Ricetl

Data Extraction for People's Republic of China Resident Identity Card

riceware

A Diceware Passphrase Implementation

rich

Computes and Compares Species Richnesses

RichR

Enrichment for Diseases in a Set of Genes

RIdeogram

Drawing SVG Graphics to Visualize and Map Genome-Wide Data in Idiograms

ridge

Ridge Regression with Automatic Selection of the Penalty Parameter

RidgeFusion

R Package for Ridge Fusion in Statistical Learning

ridigbio

Interface to the iDigBio Data API

Ridit

Ridit Analysis (An extension of the Kruskal-Wallis Test.)

ridittools

Useful Functions for Ridit Analysis

RiDMC

R interface to the idmclib library

riem

Accesses Weather Data from the Iowa Environment Mesonet

RiemBase

Functions and C++ Header Files for Computation on Manifolds

Riex

IEX Stocks and Market Data

rif

Client for 'Neuroscience' Information Framework 'APIs'

RIFS

Random Iterated Function System (RIFS)

RIGHT

R Interactive Graphics via HTML

riingo

An R Interface to the 'Tiingo' Stock Price API

rijkspalette

Create Colour Palettes Based on Famous Artworks from the Rijksmuseum

Rilostat

ILO Open Data via Ilostat Bulk Download Facility or SDMX Web Service

RImageJROI

Read 'ImageJ' Region of Interest (ROI) Files

RImagePalette

Extract the Colors from Images

RImmPort

RImmPort: Enabling Ready-for-analysis Immunology Research Data

RImpact

Calculates Measures of Scholarly Impact

rImpactStory

Retrieves altmetrics from ImpactStory. See http://impactstory.org for more about the metrics.

RImpala

Using Cloudera 'Impala' Through 'R'

rinat

Access iNaturalist Data Through APIs

rindex

Indexing for R

rinform

An R Wrapper of the 'Inform' C Library for Information Analysis of Complex Systems

ring

Circular / Ring Buffers

ringbuffer

Ring buffer (circular buffer) data structure

Ringo

R Investigation of ChIP-chip Oligoarrays

ringscale

Ringscale

RInno

An Installation Framework for Shiny Apps

RInside

C++ Classes to Embed R in C++ Applications

RInSp

R Individual Specialization (RInSp)

Rinstapkg

An Implementation of the 'Instagram' API Using Tidy Principles

rIntervalTree

An Interval Tree Tool for Real Numbers

rintrojs

Wrapper for the 'Intro.js' Library

rio

A Swiss-Army Knife for Data I/O

rioja

Analysis of Quaternary Science Data

rIP

Detects Fraud in Online Surveys by Tracing, Scoring, and Visualizing IP Addresses

Rip46

Utils for IP4 and IP6 Addresses

ripa

R Image Processing and Analysis

RIPSeeker

RIPSeeker: a statistical package for identifying protein-associated transcripts from RIP-seq experiments

RIPSeekerData

test data for RIPSeeker

ripums

Read 'IPUMS' Extract Files

Risa

Converting experimental metadata from ISA-tab into Bioconductor data structures

risaac

A fast cryptographic random number generator using ISAAC by Robert Jenkins.

rise

Conduct RISE Analysis

rIsing

High-Dimensional Ising Model Selection

Risk

Computes 26 Financial Risk Measures for Any Continuous Distribution

riskclustr

Functions to Study Etiologic Heterogeneity

riskParityPortfolio

Design of Risk Parity Portfolios

RiskPortfolios

Computation of Risk-Based Portfolios

riskPredictClustData

Assessing Risk Predictions for Clustered Data

riskR

Risk Management

riskRegression

Risk Regression Models and Prediction Scores for Survival Analysis with Competing Risks

risksetROC

Riskset ROC curve estimation from censored survival data

riskSimul

Risk Quantification for Stock Portfolios under the T-Copula Model

riskyr

Rendering Risk Literacy more Transparent

RISmed

Download Content from NCBI Databases

RITAN

Rapid Integration of Term Annotation and Network resources

RITANdata

This package contains the annotation and network data sets

Ritc

Isothermal Titration Calorimetry (ITC) Data Analysis

rite

The Right Editor to Write R

ritis

Integrated Taxonomic Information System Client

RItools

Randomization Inference Tools

riv

Robust Instrumental Variables Estimator

RIVER

R package for RIVER (RNA-Informed Variant Effect on Regulation)

RiverBuilder

River Generation for Given Data Sets

riverdist

River Network Distance Computation and Applications

RiverLoad

Load Estimation of River Compounds with Different Methods

rivernet

Read, Analyze and Plot River Networks

riverplot

Sankey or Ribbon Plots

rivervis

River Visualisation Tool

Rivivc

In vitro in vivo correlation linear level A

rivr

Steady and Unsteady Open-Channel Flow Computation

RJaCGH

Reversible Jump MCMC for the Analysis of CGH Arrays

RJafroc

Modeling, Analysis, Validation and Visualization of Observer Performance Studies in Diagnostic Radiology

rjags

Bayesian Graphical Models using MCMC

rJava

Low-Level R to Java Interface

rJavax

rJava extensions

rjazz

Official Client for 'Jazz'

RJDBC

Provides Access to Databases Through the JDBC Interface

RJDemetra

Interface to 'JDemetra+' Seasonal Adjustment Software

rjdqa

Quality Assessment for Seasonal Adjustment

rje

Miscellaneous useful functions

rjmcmc

Reversible-Jump MCMC Using Post-Processing

RJMCMCNucleosomes

Bayesian hierarchical model for genome-wide nucleosome positioning with high-throughput short-read data (MNase-Seq)

Rjms

R messaging using ActiveMQ and jms

Rjmsjars

Rjms jars

rJPSGCS

R-Interface to Gene Drop Simulation from JPSGCS

Rjpstatdb

R interface of the Gateway to Advanced and User-friendly Statistics Service

RJSDMX

R Interface to SDMX Web Services

rjson

JSON for R

rjsonapi

Consumer for APIs that Follow the JSON API Specification

RJSONIO

Serialize R Objects to JSON, JavaScript Object Notation

RJSONLD

Semantic packaging tools for standard analytics

RJSplot

Interactive Graphs with R

rJST

Joint Sentiment Topic Modelling

rjstat

Read and Write 'JSON-stat' Data Sets

rjwsacruncher

Interface to the 'JWSACruncher' of 'JDemetra+'

rJython

R interface to Python via Jython

rkafka

Using Apache 'Kafka' Messaging Queue Through 'R'

rkafkajars

External Jars Required for Package 'rkafka'

rkdb

R Client for 'kdb+'

RKEA

R/KEA Interface

RKEAjars

R/KEA Interface Jars

RKEEL

Using KEEL in R Code

RKEELdata

Datasets from 'KEEL' for it Use in 'RKEEL'

RKEELjars

Java Executable .jar Files for 'RKEEL'

rKIN

(Kernel) Isotope Niche Estimation

RKlout

Fetch Klout Scores for Twitter Users

RkMetrics

Hybrid Mortality Estimation

rknn

Random KNN Classification and Regression

Rknots

Topological Analysis of Knotted Proteins, Biopolymers and 3D Structures

rkt

Mann-Kendall Test, Seasonal and Regional Kendall Tests

RKUM

Robust Kernel Unsupervised Methods

rkvo

Read Key/Value Pair Observations

Rlab

Functions and Datasets Required for ST370 class

Rlabkey

Data Exchange Between R and 'LabKey' Server

rLakeAnalyzer

Lake Physics Tools

rLandsat

Landsat Data Complete Download Process

rlandscape

Generates random landscapes with specifiable spatial characteristics

rlang

Functions for Base Types and Core R and 'Tidyverse' Features

rlas

Read and Write 'las' and 'laz' Binary File Formats Used for Remote Sensing Data

RLastFM

R interface to last.fm API

rld

Analyze and Design Repeated Low-Dose Challenge Experiments

Rlda

Bayesian LDA for Mixed-Membership Clustering Analysis

rLDCP

Text Generation from Data

RLeafAngle

Estimates, Plots and Evaluates Leaf Angle Distribution Functions, Calculates Extinction Coefficients

rleafmap

Interactive Maps with R and Leaflet

rlecuyer

R Interface to RNG with Multiple Streams

rless

Leaner Style Sheets

rlfsm

Simulations and Statistical Inference for Linear Fractional Stable Motions

Rlgt

Bayesian Exponential Smoothing Models with Trend Modifications

Rlibeemd

Ensemble Empirical Mode Decomposition (EEMD) and Its Complete Variant (CEEMDAN)

rLiDAR

LiDAR Data Processing and Visualization

rLindo

R Interface to LINDO API

Rlinkedin

Access to the LinkedIn API via R

Rlinsolve

Iterative Solvers for (Sparse) Linear System of Equations

rlist

A Toolbox for Non-Tabular Data Manipulation

rlm

Robust Fitting of Linear Model

rlmDataDriven

Robust Regression with Data Driven Tuning Parameter

rlme

Rank-Based Estimation and Prediction in Random Effects Nested Models

RLMM

A Genotype Calling Algorithm for Affymetrix SNP Arrays

rlo

Utilities for Writing to 'LibreOffice Writer' Documents

Rlof

R Parallel Implementation of Local Outlier Factor(LOF)

RLogicalOps

Process Logical Operations

RLRsim

Exact (Restricted) Likelihood Ratio Tests for Mixed and Additive Models

RLT

Reinforcement Learning Trees

rLTP

R Interface to the 'LTP'-Cloud Service

RLumModel

Solving Ordinary Differential Equations to Understand Luminescence

RLumShiny

'Shiny' Applications for the R Package 'Luminescence'

rly

'Lex' and 'Yacc'

RM.weights

Weighted Rasch Modeling and Extensions using Conditional Maximum Likelihood

RM2

Revenue Management and Pricing Package

RM2006

RiskMetrics 2006 Methodology

rma.exact

Exact Confidence Intervals for Random Effects Meta-Analyses

rmac

calculate RMAC or FMAC agreement coefficients

rmaf

Refined Moving Average Filter

Rmagic

MAGIC - Markov Affinity-Based Graph Imputation of Cells

Rmagpie

MicroArray Gene-expression-based Program In Error rate estimation

rmake

Makefile Generator for R Analytical Projects

RMallow

Fit Multi-Modal Mallows' Models to ranking data.

Rmalschains

Continuous Optimization using Memetic Algorithms with Local Search Chains (MA-LS-Chains) in R

rmapshaper

Client for 'mapshaper' for 'Geospatial' Operations

rmapzen

Client for 'Mapzen' and Related Map APIs

rmargint

Robust Marginal Integration Procedures

RMariaDB

Database Interface and 'MariaDB' Driver

RmarineHeatWaves

Detect Marine Heat Waves and Marine Cold Spells

RMark

R Code for Mark Analysis

rmarkdown

Dynamic Documents for R

RMassBank

Workflow to process tandem MS files and build MassBank records

RMassBankData

Test dataset for RMassBank

rMAT

R implementation from MAT program to normalize and analyze tiling arrays and ChIP-chip data.

rmatio

Read and Write 'Matlab' Files

RMAWGEN

Multi-Site Auto-Regressive Weather GENerator

RMC

Functions for fitting Markov models

rmcfs

The MCFS-ID Algorithm for Feature Selection and Interdependency Discovery

rmcorr

Repeated Measures Correlation

RMCriteria

Multicriteria Package

rmd

Easily Install and Load the R Markdown Family

rmda

Risk Model Decision Analysis

rmdcev

Multiple Discrete-Continuous Extreme Value (MDCEV) Model

rmdfiltr

'Lua' filters for R Markdown

rmdformats

HTML Output Formats and Templates for 'rmarkdown' Documents

rmdHelpers

Helper Functions for Rmd Documents

rmdshower

'R' 'Markdown' Format for 'shower' Presentations

rMEA

Synchrony in Motion Energy Analysis (MEA) Time-Series

RmecabKo

An 'Rcpp' Interface for Eunjeon Project

RMediation

Mediation Analysis Confidence Intervals

RMendeley

Interface to Mendeley API methods

RMessenger

IM Client for R

rmeta

Meta-Analysis

RMETAR

Functionality to extract weather information from METAR reports.

rmetasim

An Individual-Based Population Genetic Simulation Environment

rmgarch

Multivariate GARCH Models

rmi

Mutual Information Estimators

rminer

Data Mining Classification and Regression Methods

rmio

Provides 'mio' C++11 Header Files

RmiR

Package to work with miRNAs and miRNA targets with R

RmiR.Hs.miRNA

Various databases of microRNA Targets

RmiR.hsa

Various databases of microRNA Targets

Rmisc

Rmisc: Ryan Miscellaneous

Rmixmod

Classification with Mixture Modelling

RmixmodCombi

Combining Mixture Components for Clustering

RMixpanel

API for Mixpanel

RMKdiscrete

Sundry Discrete Probability Distributions

RMKL

Multiple Kernel Learning for Classification or Regression Problems

rmmseg4j

R interface to the Java Chinese word segmentation system of mmseg4j

rmngb

Miscellaneous Collection of Functions for Medical Data Analysis

RMOA

Connect R with MOA for Massive Online Analysis

RMOAjars

External jars Required for Package RMOA

rmonad

A Monadic Pipeline System

RMongo

MongoDB Client for R

rmongodb

R-MongoDB driver

Rmonkey

A Survey Monkey R Client

Rmosek

The R to MOSEK Optimization Interface

rMouse

Automate Mouse Clicks and Send Keyboard Input

rmp

Rounded Mixture Package. Performs Probability Mass Function Estimation with Nonparametric Mixtures of Rounded Kernels

Rmpfr

R MPFR - Multiple Precision Floating-Point Reliable

Rmpi

Interface (Wrapper) to MPI (Message-Passing Interface)

rmpw

Causal Mediation Analysis Using Weighting Approach

rMR

Importing Data from Loligo Systems Software, Calculating Metabolic Rates and Critical Tensions

RMRAINGEN

RMRAINGEN (R Multi-site RAINfall GENeretor): a package to generate daily time series of rainfall from monthly mean values

rms

Regression Modeling Strategies

rms.gof

Root-mean-square goodness-of-fit test for simple null hypothesis

rmsfact

Amazing Random Facts About the World's Greatest Hacker

rmsfuns

Quickly View Data Frames in 'Excel', Build Folder Paths and Create Date Vectors

RMThreshold

Signal-Noise Separation in Random Matrices by using Eigenvalue Spectrum Analysis

RMTL

Regularized Multi-Task Learning

RMTstat

Distributions, Statistics and Tests derived from Random Matrix Theory

rmumps

Wrapper for MUMPS Library

rmutil

Utilities for Nonlinear Regression and Repeated Measurements Models

rmweather

Tools to Conduct Meteorological Normalisation on Air Quality Data

RMySQL

Database Interface and 'MySQL' Driver for R

rmytarget

Load Data from 'MyTarget API v2'

RNAdecay

Maximum Likelihood Decay Modeling of RNA Degradation Data

RnAgilentDesign028282.db

Agilent Chips that use Agilent design number 028282 annotation data (chip RnAgilentDesign028282)

RNAinteract

Estimate Pairwise Interactions from multidimensional features

RNAinteractMAPK

Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi

RNAither

Statistical analysis of high-throughput RNAi screens

RNAprobR

An R package for analysis of massive parallel sequencing based RNA structure probing data

rnaseqcomp

Benchmarks for RNA-seq Quantification Pipelines

RNAseqData.HNRNPC.bam.chr14

Aligned reads from RNAseq experiment: Transcription profiling by high throughput sequencing of HNRNPC knockdown and control HeLa cells

RnaSeqGeneEdgeRQL

Gene-level RNA-seq differential expression and pathway analysis using Rsubread and the edgeR quasi-likelihood pipeline

rnaSeqMap

rnaSeq secondary analyses

RNAseqNet

Log-Linear Poisson Graphical Model with Hot-Deck Multiple Imputation

RNASeqPower

Sample size for RNAseq studies

RnaSeqSampleSize

RnaSeqSampleSizeData

RnaSeqTutorial

RNA-Seq Tutorial (EBI Cambridge UK, October 2011)

rnaseqWrapper

Wrapper for several R packages and scripts to automate RNA-seq analysis

RNAsmc

RNA Secondary Structure Module Mining, Comparison and Plotting

rnassqs

Access the NASS 'Quick Stats' API

RNAstructureModuleMiner

RNA Secondary Structure Comparison and Module Mining

rnaturalearth

World Map Data from Natural Earth

rnaturalearthdata

World Vector Map Data from Natural Earth Used in 'rnaturalearth'

RnavGraph

Using Graphs as a Navigational Infrastructure

RnavGraphImageData

Image Data Used in the Loon Package Demos

RNaviCell

Visualization of High-Throughput Data on Large-Scale Biological Networks

RnBeads

RnBeads.hg19

RnBeads.hg38

RnBeads.mm10

RnBeads.mm9

RnBeads.rn5

rnbn

Access NBN Data

RNCBI

The java ncbi interface to R

RNCBIAxis2Libs

Axis2 libraries for use in the R environment.

RNCBIEUtilsLibs

EUtils libraries for use in the R environment.

RNCEP

Obtain, Organize, and Visualize NCEP Weather Data

rncl

An Interface to the Nexus Class Library

RND

Risk Neutral Density Extraction Package

RndTexExams

Build and Grade Multiple Choice Exams with Randomized Content

RNentropy

Entropy Based Method for the Detection of Significant Variation in Gene Expression Data

RNeo4j

Neo4j Driver for R

rneos

XML-RPC Interface to NEOS

rnetcarto

Fast Network Modularity and Roles Computation by Simulated Annealing (Rgraph C Library Wrapper for R)

RNetCDF

Interface to NetCDF Datasets

RNetLogo

Provides an Interface to the Agent-Based Modelling Platform 'NetLogo'

Rnets

Resistance Relationship Networks using Graphical LASSO

RNewsflow

Tools for Comparing Text Messages Across Time and Media

RNeXML

Semantically Rich I/O for the 'NeXML' Format

RNGforGPD

Random Number Generation for Generalized Poisson Distribution

rngSetSeed

Seeding the Default RNG with a Numeric Vector

rngtools

Utility Functions for Working with Random Number Generators

rngWELL

Toolbox for WELL Random Number Generators

rngwell19937

Random number generator WELL19937a with 53 or 32 bit output

RNHANES

Facilitates Analysis of CDC NHANES Data

RNifti

Fast R and C++ Access to NIfTI Images

Rniftilib

Rniftilib - R Interface to NIFTICLIB (V2.0.0: 2010-07-20)

RNiftyReg

Image Registration Using the 'NiftyReg' Library

Rnightlights

Satellite Nightlight Data Extraction

Rnits

R Normalization and Inference of Time Series data

Rnmr1D

Perform the Complete Processing of a Set of Proton Nuclear Magnetic Resonance Spectra

rnn

Recurrent Neural Network

rnoaa

'NOAA' Weather Data from R

rNOMADS

An R Interface to the NOAA Operational Model Archive and Distribution System

RNOmni

Rank Normal Transformation Omnibus Test

rnpn

Interface to the National 'Phenology' Network 'API'

rnr

Rosenbaum and Rubin Sensitivity

RNRCS

Download NRCS Data

rnrfa

UK National River Flow Archive Data from R

rnu34.db

Affymetrix Rat Neurobiology U34 Array annotation data (chip rnu34)

rnu34cdf

rnu34probe

Probe sequence data for microarrays of type rnu34

Rnumerai

Interface to the Numerai Machine Learning Tournament API

roadoi

Find Free Versions of Scholarly Publications via Unpaywall

roahd

Robust Analysis of High Dimensional Data

roar

Identify differential APA usage from RNA-seq alignments

ROAuth

R Interface For OAuth

RobAStBase

Robust Asymptotic Statistics

RobAStRDA

Interpolation Grids for Packages of the 'RobASt' - Family of Packages

robcbi

Conditionally Unbiased Bounded Influence Estimates

robCompositions

Compositional Data Analysis

robcor

Robust Correlations

robcp

Robust Change-Point Tests

Roberts2005Annotation.db

Roberts2005Annotation Annotation Data (Roberts2005Annotation)

robeth

R Functions for Robust Statistics

robets

Forecasting Time Series with Robust Exponential Smoothing

RobExtremes

Optimally Robust Estimation for Extreme Value Distributions

robfilter

Robust Time Series Filters

robFitConGraph

Graph-Constrained Robust Covariance Estimation

RobinHood

Interface for the RobinHood.com No Commission Investing Platform

robis

Ocean Biogeographic Information System (OBIS) Client

RobLox

Optimally Robust Influence Curves and Estimators for Location and Scale

RobLoxBioC

Infinitesimally Robust Estimators for Preprocessing -Omics Data

robmed

(Robust) Mediation Analysis

robmixglm

Robust Generalized Linear Models (GLM) using Mixtures

Robocoap

Generation of Dynamic Coappearance Matrices Within Texts

robotstxt

A 'robots.txt' Parser and 'Webbot'/'Spider'/'Crawler' Permissions Checker

RobPer

Robust Periodogram and Periodicity Detection Methods

robreg3S

Three-Step Regression and Inference for Cellwise and Casewise Contamination

RobRex

Optimally Robust Influence Curves for Regression and Scale

RobRSVD

Robust Regularized Singular Value Decomposition

RObsDat

Data Management for Hydrology and Beyond Using the Observations Data Model

RobStatTM

Robust Statistics: Theory and Methods

robsurvey

Robust Survey Statistics Estimation

robumeta

Robust Variance Meta-Regression

robust

Port of the S+ "Robust Library"

RobustAFT

Truncated Maximum Likelihood Fit and Robust Accelerated Failure Time Regression for Gaussian and Log-Weibull Case

robustarima

Robust ARIMA Modeling

robustbase

Basic Robust Statistics

robustBLME

Robust Bayesian Linear Mixed-Effects Models using ABC

RobustCalibration

Robust Calibration of Imperfect Mathematical Models

robustDA

Robust Mixture Discriminant Analysis

RobustEM

Robust Mixture Modeling Fitted via Spatial-EM Algorithm for Model-Based Clustering and Outlier Detection

robustETM

Robust Methods using Exponential Tilt Model

robustfa

An Object Oriented Solution for Robust Factor Analysis

robustgam

Robust Estimation for Generalized Additive Models

RobustGaSP

Robust Gaussian Stochastic Process Emulation

robustHD

Robust Methods for High-Dimensional Data

robustlmm

Robust Linear Mixed Effects Models

robustloggamma

Robust Estimation of the Generalized log Gamma Model

robustrank

Robust Rank-Based Tests

RobustRankAggreg

Methods for robust rank aggregation

robustrao

An Extended Rao-Stirling Diversity Index to Handle Missing Data

robustreg

Robust Regression Functions

robustsae

Robust Bayesian Small Area Estimation

robustSingleCell

Robust Clustering of Single Cell RNA-Seq Data

robustvarComp

Robust Estimation of Variance Component Models

robustX

'eXtra' / 'eXperimental' Functionality for Robust Statistics

ROC

utilities for ROC, with uarray focus

ROC632

Construction of diagnostic or prognostic scoring system and internal validation of its discriminative capacities based on ROC curve and 0.633+ boostrap resampling.

rocc

ROC based classification

roccv

ROC for Cross Validation Results

ROCit

Performance Assessment of Binary Classifier with Visualization

rock

Reproducible Open Coding Kit

rockchalk

Regression Estimation and Presentation

RockFab

Rock fabric and strain analysis tools.

rocNIT

Non-Inferiority Test for Paired ROC Curves

rococo

Robust Rank Correlation Coefficient and Test

rocplus

ROC, Precision-Recall, Convex Hull and other plots.

ROCR

Visualizing the Performance of Scoring Classifiers

ROCS

Receiver Operating Characteristics Surface

rocsvm.path

The Entire Solution Paths for ROC-SVM

ROCt

Time-Dependent ROC Curve Estimators and Expected Utility Functions

rocTree

Receiver Operating Characteristic (ROC)-Guided Classification and Survival Tree

ROCwoGS

Non-parametric estimation of ROC curves without Gold Standard Test

Rodam

Wrapper Functions for 'ODAM' (Open Data for Access and Mining) Web Services

RODBC

ODBC Database Access

RODBCDBI

Provides Access to Databases Through the ODBC Interface

RODBCext

Parameterized Queries Extension for RODBC

rodd

Optimal Discriminating Designs

rODE

Ordinary Differential Equation (ODE) Solvers Written in R Using S4 Classes

rodeo

A Code Generator for ODE-Based Models

rodham

Fetch Hillary Rodham Clinton's Emails

RODM

R interface to Oracle Data Mining

ROI

R Optimization Infrastructure

ROI.models.globalOptTests

'ROI' Optimization Problems Based on 'globalOptTests'

ROI.models.miplib

R Optimization Infrastructure: 'MIPLIB' 2010 Benchmark Instances

ROI.models.netlib

'ROI' Optimization Problems Based on 'NETLIB-LP'

ROI.plugin.alabama

'alabama' Plug-in for the 'R' Optimization Infrastructure

ROI.plugin.clp

'Clp (Coin-or linear programming)' Plugin for the 'R' Optimization Interface

ROI.plugin.cplex

ROI Plug-in CPLEX

ROI.plugin.deoptim

'DEoptim' and 'DEoptimR' Plugin for the 'R' Optimization Interface

ROI.plugin.ecos

'ECOS' Plugin for the 'R' Optimization Infrastructure

ROI.plugin.glpk

'ROI' Plug-in 'GLPK'

ROI.plugin.ipop

ROI Plug-in {ipop}

ROI.plugin.lpsolve

'lp_solve' Plugin for the 'R' Optimization Infrastructure

ROI.plugin.msbinlp

'Multi-Solution' Binary Linear Problem Plug-in for the 'R' Optimization Interface

ROI.plugin.neos

'NEOS' Plug-in for the 'R' Optimization Interface

ROI.plugin.nloptr

'nloptr' Plug-in for the 'R' Optimization Infrastructure

ROI.plugin.optimx

'optimx' Plug-in for the 'R' Optimization Infrastructure

ROI.plugin.qpoases

'qpOASES' Plugin for the 'R' Optimization Infrastructure

ROI.plugin.quadprog

ROI Plug-in {quadprog}

ROI.plugin.scs

'SCS' Plug-in for the 'R' Optimization Infrastructure

ROI.plugin.symphony

ROI Plug-in SYMPHONY

rolasized

Solarized colours in R

Roleswitch

Infer miRNA-mRNA interactions using paired expression data from a single sample

Rolexa

Statistical analysis of Solexa sequencing data

roll

Rolling Statistics

rollbar

Error Tracking and Logging

rollmatch

Rolling Entry Matching

rollply

Moving-Window Add-on for 'plyr'

rollRegres

Fast Rolling and Expanding Window Linear Regression

roloc

Convert Colour Specification to Colour Name

rolocISCCNBS

A Colour List and Colour Metric Based on the ISCC-NBS System of Color Designation

ROlogit

Fit Rank-Ordered Logit (RO-Logit) Model

rolr

Finding Optimal Three-Group Splits Based on a Survival Outcome

rols

An R interface to the Ontology Lookup Service

rolypoly

Identifying Trait-Relevant Functional Annotations

roma

R wrapper for the OMA REST API

romero.gateway

OMERO R Gateway

ROMIplot

Plots Surfaces of Rates of Mortality Improvement

RonFHIR

Read and Search Interface to the 'HL7 FHIR' REST API

ROntoTools

R Onto-Tools suite

Rook

Rook - a web server interface for R

roots

Reconstructing Ordered Ontogenic Trajectories

RootsExtremaInflections

Finds Roots, Extrema and Inflection Points of a Curve

rootSolve

Nonlinear Root Finding, Equilibrium and Steady-State Analysis of Ordinary Differential Equations

rootWishart

Distribution of Largest Root for Single and Double Wishart Settings

rope

Model Selection with FDR Control of Selected Variables

ropenaq

Accesses Air Quality Data from the Open Data Platform OpenAQ

ropendata

Query and Download 'Rapid7' 'Cybersecurity' Data Sets

ROpenDota

Access OpenDota Services in R

ROpenFIGI

R Interface to OpenFIGI

ropensecretsapi

R Package for the OpenSecrets.org API

ropensnp

Interface to OpenSNP API methods

ROpenWeatherMap

R Interface to OpenWeatherMap API

roperators

Additional Operators to Help you Write Cleaner R Code

ropercenter

Reproducible Data Retrieval from the Roper Center Data Archive

Ropj

Import Origin(R) Project Files

ropls

PCA, PLS(-DA) and OPLS(-DA) for multivariate analysis and feature selection of omics data

roprov

Low-Level Support for Provenance Capture Between in-Memory R Objects

ROptEst

Optimally Robust Estimation

ROptEstOld

Optimally Robust Estimation - Old Version

roptim

General Purpose Optimization in R using C++

ROptimizely

R Optimizely API

ROptRegTS

Optimally Robust Estimation for Regression-Type Models

ROptSpace

Matrix Reconstruction from a Few Entries

ror

Robust Ordinal Regression MCDA library

ROracle

OCI Based Oracle Database Interface for R

rorcid

Interface to the 'Orcid.org' API

rorutadis

Robust Ordinal Regression UTADIS

ROSE

ROSE: Random Over-Sampling Examples

rosetta

Parallel Use of Statistical Packages in Teaching

rosetteApi

'Rosette' API

rosm

Plot Raster Map Tiles from Open Street Map and Other Sources

rospca

Robust Sparse PCA using the ROSPCA Algorithm

rosqp

Quadratic Programming Solver using the 'OSQP' Library

rosr

Create Reproducible Research Projects

rotasym

Tests for Rotational Symmetry on the Hypersphere

rotationForest

Fit and Deploy Rotation Forest Models

rotations

Tools for Working with Rotation Data

Rothermel

Rothermel fire spread model for R

rotl

Interface to the 'Open Tree of Life' API

rotor

Log Rotation and Conditional Backups

ROTS

Reproducibility-Optimized Test Statistic

RoughSets

Data Analysis Using Rough Set and Fuzzy Rough Set Theories

RoundAndRound

Plot Objects Moving in Orbits

Routliers

Robust Outliers Detection

routr

A Simple Router for HTTP and WebSocket Requests

rowr

Row-Based Functions for R Objects

roxygen

Literate Programming in R

roxygen2

In-Line Documentation for R

roxygen2md

'Roxygen' to 'Markdown'

roxyPackage

Utilities to automate package builds

royston

Royston's H Test: Multivariate Normality Test

RPA

RPA: Robust Probabilistic Averaging for probe-level analysis

rPACI

Placido Analysis of Corneal Irregularity

rPackedBar

Packed Bar Charts with 'plotly'

rpact

Confirmatory Adaptive Clinical Trial Design and Analysis

RPANDA

Phylogenetic ANalyses of DiversificAtion

rpanel

Simple Interactive Controls for R using the 'tcltk' Package

rpart

Recursive Partitioning and Regression Trees

rpart.plot

Plot 'rpart' Models: An Enhanced Version of 'plot.rpart'

rpart.utils

Tools for parsing and manipulating rpart objects, including generating machine readable rules.

rpartitions

Code for integer partitioning

rpartScore

Classification trees for ordinal responses

rpatrec

Recognising Visual Charting Patterns in Time Series Data

rpca

RobustPCA: Decompose a Matrix into Low-Rank and Sparse Components

rpcdsearch

Tools for the Construction of Clinical Code Lists for Primary Care Database Studies

RPCLR

RPCLR (Random-Penalized Conditional Logistic Regression)

Rpdb

Read, Write, Visualize and Manipulate PDB Files

rpdo

Pacific Decadal Oscillation Index Data

RpeakChrom

Tools for Chromatographic Column Characterization and Modelling Chromatographic Peak

RPEnsemble

Random Projection Ensemble Classification

RPEXE.RPEXT

Reduced Piecewise Exponential Estimate/Test Software

rpf

Response Probability Functions

rpg

Easy Interface to Advanced PostgreSQL Features

rpgm

Fast Simulation of Normal/Exponential Random Variables and Stochastic Differential Equations / Poisson Processes

RpgSQL

DBI/RJDBC interface to PostgreSQL Database

rphast

Interface to 'PHAST' Software for Comparative Genomics

Rphylip

An R interface for PHYLIP

Rphylopars

Phylogenetic Comparative Tools for Missing Data and Within-Species Variation

rphylopic

Get 'Silhouettes' of 'Organisms' from 'Phylopic'

rphylotastic

Interface to 'Phylotastic' Web Services

rpicosat

R Bindings for the 'PicoSAT' SAT Solver

rpinterest

Access Pinterest API

Rpipedrive

'Pipedrive API's' Functions to Improvement and Integration's Systems

rpivotTable

Build Powerful Pivot Tables and Dynamically Slice & Dice your Data

rPlant

Interface to the Agave API

rplexos

Read and Analyze 'PLEXOS' Solutions

rplos

Interface to the Search API for 'PLoS' Journals

rplotengine

R as a Plotting Engine

RPMG

Graphical User Interface (GUI) for Interactive R Analysis Sessions

RPMM

Recursively Partitioned Mixture Model

rpms

Recursive Partitioning for Modeling Survey Data

rpn

Converter and Interpreter for Reverse Polish Notation Expressions

rpnf

Point and Figure Package

Rpoet

'PoetryDB' API Wrapper

Rpolyhedra

Polyhedra Database

Rpoppler

PDF Tools Based on Poppler

rPorta

R/PORTA interface

rportfolios

Random portfolio generation

rpostgis

R Interface to a 'PostGIS' Database

rpostgisLT

Managing Animal Movement Data with 'PostGIS' and R

RPostgres

'Rcpp' Interface to 'PostgreSQL'

RPostgreSQL

R Interface to the 'PostgreSQL' Database System

rPowerSampleSize

Sample Size Computations Controlling the Type-II Generalized Family-Wise Error Rate

RPPanalyzer

Reads, Annotates, and Normalizes Reverse Phase Protein Array Data

rppo

Access the Global Plant Phenology Data Portal

rpql

Regularized PQL for Joint Selection in GLMMs

rPraat

Interface to Praat

rPref

Database Preferences and Skyline Computation

RPresto

DBI Connector to Presto

rprev

Estimating Disease Prevalence from Registry Data

rprime

Functions for Working with 'Eprime' Text Files

rprintf

Adaptive Builder for Formatted Strings

RProbSup

Calculates Probability of Superiority

Rprofet

WOE Transformation and Scorecard Builder

rprojroot

Finding Files in Project Subdirectories

RProtoBuf

R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3)

RProtoBufLib

C++ headers and static libraries of Protocol buffers

RPS

Resistant Procrustes Superimposition

rpsftm

Rank Preserving Structural Failure Time Models

RpsiXML

R interface to PSI-MI 2.5 files

rpst

Recursive Partitioning Survival Trees

rpsychi

Statistics for psychiatric research

RPtests

Goodness of Fit Tests for High-Dimensional Linear Regression Models

rptR

Repeatability Estimation for Gaussian and Non-Gaussian Data

rpubchem

An Interface to the PubChem Collection

RPublica

ProPublica API Client

rpud

R functions for computation on GPU

RPushbullet

R Interface to the Pushbullet Messaging Service

rpx

R Interface to the ProteomeXchange Repository

RPyGeo

ArcGIS Geoprocessing via Python

rPython

Package Allowing R to Call Python

Rqc

Quality Control Tool for High-Throughput Sequencing Data

RQDA

Qualitative Data Analysis

rqdatatable

'rquery' for 'data.table'

RQEntangle

Quantum Entanglement of Bipartite System

RQGIS

Integrating R with QGIS

rqPen

Penalized Quantile Regression

rqt

rqt: utilities for gene-level meta-analysis

Rquake

Seismic Hypocenter Determination

RQuantLib

R Interface to the 'QuantLib' Library

rqubic

Qualitative biclustering algorithm for expression data analysis in R

rquery

Relational Query Generator for Data Manipulation at Scale

rr

Statistical Methods for the Randomized Response Technique

rr2

R2s for Regression Models

Rramas

Matrix Population Models

rRAP

Real-Time Adaptive Penalization for Streaming Lasso Models

RRate

Estimating Replication Rate for Genome-Wide Association Studies

Rraven

Connecting R and 'Raven' Sound Analysis Software

rrBLUP

Ridge Regression and Other Kernels for Genomic Selection

rrBlupMethod6

Re-parametrization of RR-BLUP to allow for a fixed residual variance

RRBSdata

An RRBS data set with 12 samples and 10,000 simulated DMRs

rrcov

Scalable Robust Estimators with High Breakdown Point

rrcov3way

Robust Methods for Multiway Data Analysis, Applicable also for Compositional Data

rrcovHD

Robust Multivariate Methods for High Dimensional Data

rrcovNA

Scalable Robust Estimators with High Breakdown Point for Incomplete Data

rrd

Import Data from a RRD (Round Robin Database) File

rrdf

rrdf - support for the Resource Description Framework

rrdflibs

rrdflibs - package with Jena and Apache HTTP libraries for use with rrdf

rRDP

Interface to the RDP Classifier

rRDPData

Database for the Default RDP Classifier

Rrdrand

'DRNG' on Intel CPUs with the 'RdRand' Instruction for R

rrecsys

Environment for Evaluating Recommender Systems

rredis

"Redis" Key/Value Database Client

rredlist

'IUCN' Red List Client

RRedshiftSQL

R Interface to the 'Redshift' Database

rrefine

R Client for OpenRefine API

rreg

Visualization for Norwegian Health Quality Registries

rrepast

Invoke 'Repast Simphony' Simulation Models

rres

Realized Relatedness Estimation and Simulation

RRF

Regularized Random Forest

RRHO

Inference on agreement between ordered lists

rriskBayes

Predefined Bayes models fitted with Markov chain Monte Carlo (MCMC) (related to the 'rrisk' project)

rriskDistributions

Fitting Distributions to Given Data or Known Quantiles

rrlda

Robust Regularized Linear Discriminant Analysis

RRNA

Secondary Structure Plotting for RNA

rroad

Road Condition Analysis

rromeo

Access Publisher Copyright & Self-Archiving Policies via the 'SHERPA/RoMEO' API

rrpack

Reduced-Rank Regression

RRphylo

Phylogenetic Ridge Regression Methods for Comparative Studies

RRPP

Linear Model Evaluation with Randomized Residuals in a Permutation Procedure

rrr

Reduced-Rank Regression

RRreg

Correlation and Regression Analyses for Randomized Response Data

rrscale

Robust Re-Scaling to Better Recover Latent Effects in Data

rrtable

Reproducible Research with a Table of R Codes

RRTCS

Randomized Response Techniques for Complex Surveys

rrules

Generic rule engine for R

rrum

Bayesian Estimation of the Reduced Reparameterized Unified Model with Gibbs Sampling

RSA

Response Surface Analysis

RSADBE

Data related to the book "R Statistical Application Development by Example"

rsae

Robust Small Area Estimation

RSAGA

SAGA Geoprocessing and Terrain Analysis

RSAgeo

Resampling-Based Analysis of Geostatistical Data

RSAlgaeR

Builds Empirical Remote Sensing Models of Water Quality Variables and Analyzes Long-Term Trends

rsam

'RStudio' Addin Manager

rsample

General Resampling Infrastructure

Rsampletrees

MCMC Sampling of Gene Genealogies Conditional on Genetic Data

Rsampling

Ports the Workflow of "Resampling Stats" Add-in to R

Rsamtools

Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import

RSAP

SAP Netweaver RFC connector for R

rSARP

Functions to Create and Evaluate Search and Rescue Plans

RSarules

Random Sampling Association Rules from a Transaction Dataset

RSauceLabs

R Wrapper for 'SauceLabs' REST API

rsbml

R support for SBML, using libsbml

rSCA

An R Package for Stepwise Cluster Analysis

RSCABS

Rao-Scott Cochran-Armitage by Slices Trend Test

rscala

Bridge Between 'R' and 'Scala' with Callbacks

RSCAT

Shadow-Test Approach to Computerized Adaptive Testing

rscimark

SciMark 2.0 Benchmark for Scientific and Numerical Computing

RSclient

Client for Rserve

Rsconctdply

Deploys Multiple 'Shiny' Apps using Configuration File

rsconnect

Deployment Interface for R Markdown Documents and Shiny Applications

rscopus

Scopus Database 'API' Interface

rscorecard

A Method to Download Department of Education College Scorecard Data

rscproxy

statconn: provides portable C-style interface to R (StatConnector)

RSDA

R to Symbolic Data Analysis

rsdepth

Ray Shooting Depth (i.e. RS Depth) functions for bivariate analysis

rsdmx

Tools for Reading SDMX Data and Metadata

RSE

Number of Newly Discovered Rare Species Estimation

rSEA

Simultaneous Enrichment Analysis

RSearchYJ

rsed

Stream Editing

RSeed

Borenstein Analysis

rseedcalc

Estimating the Proportion of Genetically Modified Seeds in Seedlots via Multinomial Group Testing

RSEIS

Seismic Time Series Analysis Tools

RSelenium

R Bindings for 'Selenium WebDriver'

rsem

Robust Structural Equation Modeling with Missing Data and Auxiliary Variables

RSentiment

Analyse Sentiment of English Sentences

RSeqAn

R SeqAn

Rserve

Binary R server

rSFA

Slow Feature Analysis in R

rSFFreader

rSFFreader reads in sff files generated by Roche 454 and Life Sciences Ion Torrent sequencers

rsgcc

Gini methodology-based correlation and clustering analysis of microarray and RNA-Seq gene expression data

Rsge

Interface to the SGE Queuing System

rsggm

Robust Sparse Gaussian Graphical Modeling via the Gamma-Divergence

RSGHB

Functions for Hierarchical Bayesian Estimation: A Flexible Approach

RSiena

Siena - Simulation Investigation for Empirical Network Analysis

rsig

Robust Signature Selection for Survival Outcomes

RsimMosaic

R Simple Image Mosaic Creation Library

rsimsum

Analysis of Simulation Studies Including Monte Carlo Error

rsinaica

Download Data from Mexico's Air Quality Information System

RSIP

Remote Sensing and Image Processing

RSiteCatalyst

R Client for Adobe Analytics API V1.4

RSKC

Robust Sparse K-Means

rskey

Create Custom 'Rstudio' Keyboard Shortcuts

rslp

A Stemming Algorithm for the Portuguese Language

rslurm

Submit R Calculations to a Slurm Cluster

rsm

Response-Surface Analysis

RSmartlyIO

Loading Facebook and Instagram Advertising Data from 'Smartly.io'

RSMET

Get Real-Time Meteorological Data in SMET Format

rsml

Plant Root System Markup Language (RSML) File Processing

Rsmlx

R Speaks 'Monolix'

rsMove

Guidelines for the use of Remote Sensing in Movement Ecology

RSNNS

Neural Networks using the Stuttgart Neural Network Simulator (SNNS)

rsnps

Get 'SNP' ('Single-Nucleotide' 'Polymorphism') Data on the Web

RSNPset

Efficient Score Statistics for Genome-Wide SNP Set Analysis

RSocrata

Download or Upload 'Socrata' Data Sets

RSofia

Port of sofia-ml (http://code.google.com/p/sofia-ml/) to R

rsoi

Import Various Northern and Southern Hemisphere Climate Indices

Rsolnp

General Non-Linear Optimization

rsolr

R to Solr Interface

Rsomoclu

Somoclu

rspa

Adapt Numerical Records to Fit (in)Equality Restrictions

rSPACE

Spatially-Explicit Power Analysis for Conservation and Ecology

rSPARCS

Statistical Package for Analysis Related Cleaning Support

rsparkling

R Interface for H2O Sparkling Water

rsparse

Statistical Learning on Sparse Matrices

Rspc

Nelson Rules for Control Charts

rspear

Calculate SPEARpesticide in R (http://www.systemecology.eu/SPEAR/index.php)

RSpectra

Solvers for Large-Scale Eigenvalue and SVD Problems

RSpincalc

Conversion Between Attitude Representations of DCM, Euler Angles, Quaternions, and Euler Vectors

Rspotify

Access to Spotify API

rsppfp

R's Shortest Path Problem with Forbidden Subpaths

rsprng

R interface to SPRNG (Scalable Parallel Random Number Generators)

RSPS

RNA-Seq Power Simulation

rsq

R-Squared and Related Measures

RSQLite

'SQLite' Interface for R

RSQLite.extfuns

Math and String Extension Functions for RSQLite

RSQLServer

SQL Server R Database Interface (DBI) and 'dplyr' SQL Backend

rSQM

Statistical Downscaling Toolkit for Climate Change Scenario using Non Parametric Quantile Mapping

Rssa

A Collection of Methods for Singular Spectrum Analysis

RSSampling

Ranked Set Sampling

RSSL

Implementations of Semi-Supervised Learning Approaches for Classification

RSSOP

Simulation of Supply Reservoir Systems using Standard Operation Policy

rstack

Stack Data Type as an 'R6' Class

rstackdeque

Persistent Fast Amortized Stack and Queue Data Structures

rstan

R Interface to Stan

rstanarm

Bayesian Applied Regression Modeling via Stan

rstanemax

Emax Model Analysis with 'Stan'

rstansim

Simulation Studies with Stan

rstantools

Tools for Developing R Packages Interfacing with 'Stan'

rstap

Spatial Temporal Aggregated Predictor Models via 'stan'

RStata

A Bit of Glue Between R and Stata

rstatix

Pipe-Friendly Framework for Basic Statistical Tests

rstatscn

R Interface for China National Data

rstiefel

Random Orthonormal Matrix Generation and Optimization on the Stiefel Manifold

RStoolbox

Tools for Remote Sensing Data Analysis

RStorm

Simulate and Develop Streaming Processing

rstpm2

Generalized Survival Models

rstream

Streams of Random Numbers

rstudioapi

Safely Access the RStudio API

rsubgroup

Subgroup Discovery and Analytics

Rsubread

Subread sequence alignment and counting for R

RSuite

Supports Developing, Building and Deploying R Solution

Rsundials

Suite of Nonlinear Differential Algebraic Equations Solvers in R

rsunlight

Interface to 'Sunlight' Foundation 'APIs'

rsurface

Design of Rotatable Central Composite Experiments and Response Surface Analysis

rsurfer

Manipulating 'Freesurfer' Generated Data

Rsurrogate

Robust Estimation of the Proportion of Treatment Effect Explained by Surrogate Marker Information

RSurveillance

Design and Analysis of Disease Surveillance Activities

RSurvey

Geographic Information System Application

rsvd

Randomized Singular Value Decomposition

rsvg

Render SVG Images into PDF, PNG, PostScript, or Bitmap Arrays

RSvgDevice

An R SVG graphics device.

RSVGTipsDevice

An R SVG Graphics Device with Dynamic Tips and Hyperlinks

RSVSim

RSVSim: an R/Bioconductor package for the simulation of structural variations

RSwissMaps

Plot and Save Customised Swiss Maps

Rsymphony

SYMPHONY in R

rSymPy

R Interface to SymPy Computer Algebra System

rsyslog

Interface to the 'syslog' System Logger

rt.test

Robustified t-Test

rt3

Tic-Tac-Toe Package for R

rta10probeset.db

Affymetrix rta10 annotation data (chip rta10probeset)

rta10transcriptcluster.db

Affymetrix rta10 annotation data (chip rta10transcriptcluster)

rtable

Tabular Reporting Functions

rTableICC

Random Generation of Contingency Tables

rTANDEM

Interfaces the tandem protein identification algorithm in R

rtape

Manage and manipulate large collections of R objects stored as tape-like files

RTAQ

RTAQ: Tools for the analysis of trades and quotes in R

Rtauchen

Discretization of AR(1) Processes

RTaxometrics

Taxometric Analysis

RTCA

Open-source toolkit to analyse data from xCELLigence System (RTCA)

RTCGA

The Cancer Genome Atlas Data Integration

RTCGA.clinical

Clinical datasets from The Cancer Genome Atlas Project

RTCGA.CNV

CNV (Copy-number variation) datasets from The Cancer Genome Atlas Project

RTCGA.methylation

Methylation datasets from The Cancer Genome Atlas Project

RTCGA.miRNASeq

miRNASeq datasets from The Cancer Genome Atlas Project

RTCGA.mRNA

mRNA datasets from The Cancer Genome Atlas Project

RTCGA.mutations

Mutations datasets from The Cancer Genome Atlas Project

RTCGA.PANCAN12

PanCan 12 from Genome Cancer Browser

RTCGA.rnaseq

Rna-seq datasets from The Cancer Genome Atlas Project

RTCGA.RPPA

RPPA datasets from The Cancer Genome Atlas Project

RTCGAToolbox

A new tool for exporting TCGA Firehose data

RTConnect

Tools for analyzing sales report files of iTunes Connect.

RTD

Simple TD API Client

RTDAmeritrade

RTDE

Robust Tail Dependence Estimation

rtdists

Response Time Distributions

rtematres

The rtematres API package

rTensor

Tools for Tensor Analysis and Decomposition

rTephra

Tephra Transport Modeling

RTest

A XML-Based Testing Framework for Automated Component Tests of R Packages

rtext

R6 Objects for Text and Data

Rtextrankr

TextRank for Korean

RtextSummary

Summarizes Text by Extracting Relevant Sentences

RTextTools

Automatic Text Classification via Supervised Learning

RTextureMetrics

Functions for calculation of texture metrics for Grey Level Co-occurrence Matrices

rtf

Rich Text Format (RTF) Output

rtfbs

Transcription Factor Binding Site Identification Tool

rticles

Article Formats for R Markdown

rtide

Tide Heights

rtiff

Read and Write TIFF Files

rtika

R Interface to 'Apache Tika'

rtimes

Client for New York Times 'APIs'

rtimicropem

Supports the Analysis of RTI MicroPEM Output Files

rtip

Inequality, Welfare and Poverty Indices and Curves using the EU-SILC Data

RTisean

R interface to Tisean algorithms

rtk

Rarefaction Tool Kit

rtkore

'STK++' Core Library Integration to 'R' using 'Rcpp'

rtkpp

STK++ Integration to R using Rcpp

RTN

Reconstruction of transcriptional networks and analysis of master regulators

RTNduals

Analysis of co-regulation and inference of 'dual regulons'

Rtnmin

Truncated Newton Function Minimization with Bounds Constraints

RTNsurvival

Survival analysis using transcriptional networks inferred by the RTN package

RTOMO

Visualization for Seismic Tomography

rtop

Interpolation of Data with Variable Spatial Support

RTopper

This package is designed to perform Gene Set Analysis across multiple genomic platforms

rtracklayer

R interface to genome annotation files and the UCSC genome browser

RTransferEntropy

Measuring Information Flow Between Time Series with Shannon and Renyi Transfer Entropy

RTransProb

Analyze and Forecast Credit Migrations

Rtreemix

Rtreemix: Mutagenetic trees mixture models.

rtrek

Datasets and Functions Relating to Star Trek

rtrends

Analyze Download Logs from the CRAN RStudio Mirror

RTriangle

Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator

rtrie

A Simple R-Based Implementation of a Trie (A.k.a. Digital Tree/Radix Tree/Prefix Tree)

rtrim

Trends and Indices for Monitoring Data

rTRM

Identification of transcriptional regulatory modules from PPI networks

rTRMui

A shiny user interface for rTRM

rTRNG

Advanced and Parallel Random Number Generation via 'TRNG'

rts

Raster Time Series Analysis

rtsdata

R Time Series Intelligent Data Storage

Rtsne

T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation

rtson

Typed JSON

rtsplot

Time Series Plot

Rttf2pt1

'ttf2pt1' Program

Rtts

Convert Text into Speech

rtu34.db

Affymetrix Rat Toxicology U34 Array annotation data (chip rtu34)

rtu34cdf

rtu34probe

Probe sequence data for microarrays of type rtu34

RtutoR

Shiny Apps for Plotting and Exploratory Analysis

Rtwalk

The R Implementation of the 't-walk' MCMC Algorithm

rtweet

Collecting Twitter Data

rtype

A strong type system for R

rtypeform

Interface to 'typeform' Results

rubias

Bayesian Inference from the Conditional Genetic Stock Identification Model

Ruchardet

R Package to Detect Character Encoding

rucm

Implementation of Unobserved Components Model (UCM)

rucrdtw

R Bindings for the UCR Suite

rugarch

Univariate GARCH Models

ruimtehol

Learn Text 'Embeddings' with 'Starspace'

ruin

Simulation of Various Risk Processes

ruler

Tidy Data Validation Reports

rUnemploymentData

Data and Functions for USA State and County Unemployment Data

runibic

runibic: row-based biclustering algorithm for analysis of gene expression data in R

RUnit

R Unit Test Framework

runittotestthat

Convert 'RUnit' Test Functions into 'testthat' Tests

Runiversal

Runiversal - Package for converting R objects to Java variables and XML.

runjags

Interface Utilities, Model Templates, Parallel Computing Methods and Additional Distributions for MCMC Models in JAGS

runner

Running Operations for Vectors

runstats

Fast Computation of Running Statistics for Time Series

Runuran

R Interface to the 'UNU.RAN' Random Variate Generators

RunuranGUI

A GUI for the UNU.RAN Random Variate Generators

rusda

Interface to USDA Databases

rusk

Beautiful Graphical Representation of Multiplication Tables on a Modular Circle

rust

Ratio-of-Uniforms Simulation with Transformation

ruta

Implementation of Unsupervised Neural Architectures

ruv

Detect and Remove Unwanted Variation using Negative Controls

RUVcorr

Removal of unwanted variation for gene-gene correlations and related analysis

RUVnormalize

RUV for normalization of expression array data

RUVnormalizeData

Gender data for the RUVnormalize package

RUVSeq

Remove Unwanted Variation from RNA-Seq Data

rv

Simulation-Based Random Variable Objects

RVAideMemoire

Testing and Plotting Procedures for Biostatistics

rvalues

R-Values for Ranking in High-Dimensional Settings

Rvcg

Manipulations of Triangular Meshes Based on the 'VCGLIB' API

rvcheck

R/Package Version Check

Rvelslant

Downhole Seismic Analysis in R

RVenn

Set Operations for Many Sets

rversions

Query 'R' Versions, Including 'r-release' and 'r-oldrel'

rvertnet

Search 'Vertnet', a 'Database' of Vertebrate Specimen Records

rvest

Easily Harvest (Scrape) Web Pages

rvg

R Graphics Devices for Vector Graphics Output

rvgtest

Tools for Analyzing Non-Uniform Pseudo-Random Variate Generators

rvHPDT

Calling haplotype-based and variant-based pedigree disequilibrium test for rare variants in pedigrees.

RVideoPoker

Play Video Poker with R

RViennaCL

'ViennaCL' C++ Header Files

rviewgraph

Animated Graph Layout Viewer

rvinecopulib

High Performance Algorithms for Vine Copula Modeling

Rvmmin

Variable Metric Nonlinear Function Minimization

Rvoterdistance

Calculates the Distance Between Voter and Multiple Polling Locations

RVowpalWabbit

R Interface to the Vowpal Wabbit

RVPedigree

Methods for Family-Based Rare-Variant Genetic Association Tests

RVS

Computes estimates of the probability of related individuals sharing a rare variant

rvsel

Rare Variant Selection Procedure

RVsharing

Probability of Sharing Rare Variants among Relatives

rvTDT

population control weighted rare-variants TDT

RVtests

Rare Variant Tests

rwalkr

API to Melbourne Pedestrian Data

rwars

R Client for the Star Wars API

Rwave

Time-Frequency Analysis of 1-D Signals

rwavelet

Wavelet Analysis

rWBclimate

A package for accessing World Bank climate data

RWBP

Detects spatial outliers using a Random Walk on Bipartite Graph

rwc

Random Walk Covariance Models

RWDataPlyr

Read and Manipulate Data from 'RiverWare'

RWeather

R wrapper around the Yahoo! Weather, Google Weather and NOAA APIs

RWebLogo

plotting custom sequence logos

RWebMA

RWebServices

Expose R functions as web services through Java/Axis/Apache

rwebstat

Download Data from the Webstat API

RWeightedKmeans

Weighted Object k-Means Algorithm

RWeka

R/Weka Interface

RWekajars

R/Weka Interface Jars

rwfec

R Wireless, Forward Error Correction

rwgcod.db

Codelink Rat Whole Genome Bioarray (~34 000 rat gene targets) annotation data (chip rwgcod)

Rwhois

WHOIS Server Querying

RWiener

Wiener Process Distribution Functions

rWikiPathways

rWikiPathways - R client library for the WikiPathways API

RWildbook

Interface for the 'Wildbook' Wildlife Data Management Framework

rWind

Download, Edit and Include Wind Data in Ecological and Evolutionary Analysis

RWinEdt

R Interface to 'WinEdt'

Rwinsteps

Running Winsteps in R

rwirelesscom

Basic Wireless Communications Simulation

rWishart

Random Wishart Matrix Generation

rwm

R Workspace Management

rworldmap

Mapping Global Data

rworldxtra

Country boundaries at high resolution.

RWsearch

Lazy Search in R Packages, Task Views, CRAN, the Web. All-in-One Download

rwt

Rice Wavelet Toolbox wrapper

rwty

R We There Yet? Visualizing MCMC Convergence in Phylogenetics

rwunderground

R Interface to Weather Underground API

RxCEcolInf

'R x C Ecological Inference With Optional Incorporation of Survey Information'

RXKCD

Get XKCD Comic from R

RXMCDA

Functions to Parse and Create XMCDA Files

Rxnat

Queries and Extracts Images from Extensible Neuroimaging Archive Toolkit Public/Private Datasets

RxnSim

Functions to Compute Chemical Reaction Similarity

RxODE

Facilities for Simulating from ODE-Based Models

rxSeq

Combined Total and Allele Specific Reads Sequencing Study

RXshrink

Maximum Likelihood Shrinkage via Generalized Ridge or Least Angle Regression

rxylib

Import XY-Data into R

Ryacas

R Interface to the Yacas Computer Algebra System

ryandexdirect

Load Data From 'Yandex Direct'

RYandexTranslate

R Interface to Yandex Translate API

rym

R Interface to Yandex Metrica API

RYoudaoTranslate

R package provide functions to translate English words into Chinese.

ryouready

Companion to the Forthcoming Book - R you Ready?

rYoutheria

Access to the YouTheria Mammal Trait Database

rysgran

Grain size analysis, textural classifications and distribution of unconsolidated sediments

Rz

GUI Tool for Data Management like SPSS or Stata

RZabbix

R Module for Working with the 'Zabbix API'

rzeit2

Client for the ZEIT ONLINE Content API

RZigZag

Zig-Zag Sampler

rzmq

R Bindings for 'ZeroMQ'

RZooRoH

Partitioning of Individual Autozygosity into Multiple Homozygous-by-Descent Classes